Transcript Information: S_Transcript_31017.p1


Annotated TAIR IDAT5G17070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5613514-5616088 | Reverse length=277
E-Value3E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.162670184321
Replicate 212.517256116304
Replicate 311.06564165016
Condition 2: 8 Hour
Replicate 111.837767686245
Replicate 212.692599840498
Replicate 312.789508562989
Condition 3: 24 Hour
Replicate 114.80102309975
Replicate 212.02569593847
Replicate 311.63302456236


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31017.p1 GENE.S_Transcript_31017~~S_Transcript_31017.p1 ORF type:5prime_partial len:245 (+),score=73.13,PPP4R2|PF09184.7|1.6e-15 S_Transcript_31017:2-736(+)
AATAATGACTTGCCCCAGATGCCTGCTACTAATGGAGGTGCGGAATCTGAGCATGAGCTATCTGCTGAAGAAGTGAAGGGTGCACTTGAAATCATAGCATCTACAGGAAAATTTTGGCATGATTGGGATGAGCTAAAGGGCATGCTAGTTTTTCAGCTGAAGCAGGTTCTTTCAGAATACCCAGAAGCAACAAAAGGTGATGATCAACAAAATTCCTCTTTGGGGGAGAGCTATCTGGAGTTGGCGCAACGGTTGGACGCAGCTCTATTTAGCTTTATAGAAGGCCCCCCTTTCACATTGCAAAGACTTTGTGAGATTTTGCTTAATGCACGGACTATTTATCCAAATCTTTCAAAGCTTGCTCTTGCATTGGAAAAGAACTTGTTGGTGACAAGTACCATTACCAAGTCTACGGACCCATATCCTTCCTCAATGATGACTGTACCTAATGCCCCGGAAGAGCACGTTGAGGATGCCCAGCTTCAACCTGATCCTCAGCAGCAGCCTAAGCCTGAGTCCCAGCAGCCTGAGCCTGAGCCTGAGCCTCAGCAACCTCAACCTCAGCCTCATTCCAATTCAGTGGAAAATGGAGGGGAACTGGCAACAGGTGATAGAGATGAGGTAATGTCAGAAGTAGATACCCATGTTGATGACAGTATGACTATTGATATGGAAACCTTTGAAGAGATTATCAGTTCATCGGAAGGAAATCCAGAATCTGTTATTGATTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31017.p1 GENE.S_Transcript_31017~~S_Transcript_31017.p1 ORF type:5prime_partial len:245 (+),score=73.13,PPP4R2|PF09184.7|1.6e-15 S_Transcript_31017:2-736(+)
NNDLPQMPATNGGAESEHELSAEEVKGALEIIASTGKFWHDWDELKGMLVFQLKQVLSEYPEATKGDDQQNSSLGESYLELAQRLDAALFSFIEGPPFTLQRLCEILLNARTIYPNLSKLALALEKNLLVTSTITKSTDPYPSSMMTVPNAPEEHVEDAQLQPDPQQQPKPESQQPEPEPEPQQPQPQPHSNSVENGGELATGDRDEVMSEVDTHVDDSMTIDMETFEEIISSSEGNPESVIDS*

Click here to download the sequence:
Link to NCBI Protein BLAST