Transcript Information: S_Transcript_310232.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6262830166297
Replicate 22.9029986259888
Replicate 32.1840082204264
Condition 2: 8 Hour
Replicate 11.6835834460895
Replicate 21.6190153620855
Replicate 30.98165087654519
Condition 3: 24 Hour
Replicate 12.5868940975704
Replicate 23.2802885176292
Replicate 32.3230830373133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310232.p1 GENE.S_Transcript_310232~~S_Transcript_310232.p1 ORF type:complete len:152 (+),score=11.53,RVT_1|PF00078.23|2.7e-25 S_Transcript_310232:980-1435(+)
ATGCTTTTATGCCATGAGTTAGTAAAGGCTTATACTAGGAAACACATCTCTCCTAGATGCACCATCAAAGTTGATTTCCAAAAAGCCTATGACTCTCTTGAATGGCCTTTCTTATATCAAATCCTTGTGGAGTTGGAGTTTCCTATGAAAGTAATAAAGTGGATTATGAGCTACATCACTACAGTGTCTTATACACTGAATATTAATGGCAATTTGACAAAGCCTTTTGAGGCTAAGAGAGGCTTAAGGCAAGGGGATCCCTTTTCCCCATACTTATTTGTCCTGAGCATGGAATACCTACCCAGGTGCATGAATGAACTGCAAAACACACCTGATTTTAATTTTCACCCAAGGTGTCAGAAAATGGGCATTATCCATCTGTGCTTTGTAGATGACCTTATGTTATTCTGTGAGCTGACAGAATGTCTGTTACTCTGCTTCATCAAACCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310232.p1 GENE.S_Transcript_310232~~S_Transcript_310232.p1 ORF type:complete len:152 (+),score=11.53,RVT_1|PF00078.23|2.7e-25 S_Transcript_310232:980-1435(+)
MLLCHELVKAYTRKHISPRCTIKVDFQKAYDSLEWPFLYQILVELEFPMKVIKWIMSYITTVSYTLNINGNLTKPFEAKRGLRQGDPFSPYLFVLSMEYLPRCMNELQNTPDFNFHPRCQKMGIIHLCFVDDLMLFCELTECLLLCFIKPS*

Click here to download the sequence:
Link to NCBI Protein BLAST