Transcript Information: S_Transcript_31025.p1


Annotated TAIR IDAT5G17070.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5613514-5616088 | Reverse length=277
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1871857766683
Replicate 22.5101377340885
Replicate 33.4235019077342
Condition 2: 8 Hour
Replicate 14.0863023362171
Replicate 23.6170054686983
Replicate 32.4251563143392
Condition 3: 24 Hour
Replicate 12.2237306547311
Replicate 22.985651824429
Replicate 32.4164832962986


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31025.p1 GENE.S_Transcript_31025~~S_Transcript_31025.p1 ORF type:5prime_partial len:167 (+),score=19.46 S_Transcript_31025:2-502(+)
AATAATGACTTGCCCCAGATGCCTGCTACTAATGGAGGTGCGGAATCTGAGCATGAGCTATCTGCTGAAGAAGTGAAGGGTGCACTTGAAATCATAGCATCTACAGGAAAATTTTGGCATGATTGGGATGAGCTAAAGGGCATGCTAGTTTTTCAGCTGAAGCAGGTAATGGTGAGGTTCTTTCAGAATACCCAGAAGCAACAAAAGGTGATGATCAACAAAATTCCTCTTTGGGGGAGAGCTATCCGGAGTTGGCGCAAAGGTTGGAGGCAGGTATCTATAAAGTTTTCTTCACCATGTCTCTTCTTCTGTGTATCTATTGTCCTTTGTCATTGGCATCTAGGCGCTATGTATTTGATTTTACAATTTTCGGTATTATGCTATACTTGTACTCATTTTTTGGCATCTGTTAGTTTTCCTCCTACAAATTTTTGTATTCCTCTATCTCCACCTAATGTGTGGTATTATTTGACCTTTAATTTGATACTCTGTATGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31025.p1 GENE.S_Transcript_31025~~S_Transcript_31025.p1 ORF type:5prime_partial len:167 (+),score=19.46 S_Transcript_31025:2-502(+)
NNDLPQMPATNGGAESEHELSAEEVKGALEIIASTGKFWHDWDELKGMLVFQLKQVMVRFFQNTQKQQKVMINKIPLWGRAIRSWRKGWRQVSIKFSSPCLFFCVSIVLCHWHLGAMYLILQFSVLCYTCTHFLASVSFPPTNFCIPLSPPNVWYYLTFNLILCMS*

Click here to download the sequence:
Link to NCBI Protein BLAST