Transcript Information: S_Transcript_310336.p1


Annotated TAIR IDAT3G13980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4619189-4620262 | Reverse length=357
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67803824803008
Replicate 20.51526684741542
Replicate 30.43072207413929
Condition 2: 8 Hour
Replicate 10.22638418595683
Replicate 20.23749308534742
Replicate 30.18102630662405
Condition 3: 24 Hour
Replicate 10.37103836077442
Replicate 20.38494796732649
Replicate 30.58904986933392


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310336.p1 GENE.S_Transcript_310336~~S_Transcript_310336.p1 ORF type:5prime_partial len:471 (+),score=72.88 S_Transcript_310336:3-1415(+)
CACCTTCAAAAACCTCCTCAAACATGCACGCGCATGCCCCTCTCCTTTTTTTTTTACTCTCTCTCTCTTTCTCTGTTTTTCCTGTCCTTTGATCTCCCAAAGCGTGTCCTATTTTCCCCCTCCCTCATCTTTCTCTTTCCCCTTCTCATAATTTTGTTTCTTCTCCACTATTCTCCTCTTTTCTCTCTTTCATCTACAGAAACCAAAAAAAACTTGTCACAAATGTACAAGTGGGAGAAACCCAAAGACATCTACAAACATGTCCACCATCACCAAGATTATGATCCTAAATACCCAACATTCTCATCTTCACTCCTTGACCAAATCAACAAATCCCTCAAAACCCACCAAGAAGAGGAGCTCAGCTTCTTCAGAGAACCCCAAGGCCAAAACATCACCAACCAAGAGAAAAAAATGTCCAGTCTAAGAAGGGCCTGTTTGGTTGAGAAGTGGATGGAGAAGAAGGTCAACGAGAAGATCATCTCCCGAAACTCAAAACCCCAAACAACCCCCACCACCCGAACCACATTGCTCGACGAGTTCGACATCCAGGACACCCTGTTCTTCAGCTCCACCACCACCACCAAAACAGAGTATTCTGTTTTCCTCCAGAAATCCTCAGGCCGGGGGCGGGCTCAGGCCCATCCTCCTCCGAGGCCCGAACGGGTCGCGACCCGGCCCGCCATCGAGTCGACATACCTGCAGAAGGCAAGAGTGCAGTCGTCGAACAAGTCAAGGGCAAACAAGATATACTCGAACCTGCTAAAACAGCCCATCTCGCCTGGGGCCCGCTTATCGGGTTTTATAAGCTCGTTGTTCAAAGAAGGCAAGAGTGGGAGCAGAAGTAAGAAGAAAGAGTGTACAAGTAGCAGGTCAGAGCAAGCATCTACTTGTTCTTCAGCTTCTTCATTTTCAAGGTCTTGTTTGAGCAAAAACAGCTCACCCAAAAACAGTAATGGTGGTAACTGTAATAATAAAAGGACGGTTAGATTTTGTCTTGATGAGGATTCACGCCATTGTGGAGAGAAATCAAAGTTTTCAAGGTCAATATCAAAGAGGTATCAAGAGTTGAGGAAATTGAATGGGTTAGAGAGGGAAAATAATCAAAAAGATCTTGAAGAAATTGCACTGGATTTGTTGAGCGGTTATTGGGATTCCAAATTGAATAGTAGTACTAGTAATAGTAAGATAGCCAATCATAGCGATACACATGTTAAAGAGAAGATGATTAATGATGGTGATTATGCTGCCAATCACGGCGGTAATTACGATGGTGATGATGGTGATTATGATGATGATGATGATGGGTTGAGTTGTTCAAGTTCAGATTTGTTTGAGTTAGATCATCTCTCATTAATTGGGAATGAGCTCCCTGTTTATGAGACTACTCAATTTGATTCCAGTTATCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310336.p1 GENE.S_Transcript_310336~~S_Transcript_310336.p1 ORF type:5prime_partial len:471 (+),score=72.88 S_Transcript_310336:3-1415(+)
HLQKPPQTCTRMPLSFFFYSLSLSLFFLSFDLPKRVLFSPSLIFLFPLLIILFLLHYSPLFSLSSTETKKNLSQMYKWEKPKDIYKHVHHHQDYDPKYPTFSSSLLDQINKSLKTHQEEELSFFREPQGQNITNQEKKMSSLRRACLVEKWMEKKVNEKIISRNSKPQTTPTTRTTLLDEFDIQDTLFFSSTTTTKTEYSVFLQKSSGRGRAQAHPPPRPERVATRPAIESTYLQKARVQSSNKSRANKIYSNLLKQPISPGARLSGFISSLFKEGKSGSRSKKKECTSSRSEQASTCSSASSFSRSCLSKNSSPKNSNGGNCNNKRTVRFCLDEDSRHCGEKSKFSRSISKRYQELRKLNGLERENNQKDLEEIALDLLSGYWDSKLNSSTSNSKIANHSDTHVKEKMINDGDYAANHGGNYDGDDGDYDDDDDGLSCSSSDLFELDHLSLIGNELPVYETTQFDSSYL*

Click here to download the sequence:
Link to NCBI Protein BLAST