Transcript Information: S_Transcript_310453.p1


Annotated TAIR IDAT5G47790.1
Annotated Gene NameSMAD/FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19351396-19352579 | Forward length=369
E-Value2.7E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9007347416942
Replicate 27.3542631858383
Replicate 37.6844733681669
Condition 2: 8 Hour
Replicate 15.9977660266937
Replicate 27.4572828799089
Replicate 37.3273226142123
Condition 3: 24 Hour
Replicate 19.4433610922881
Replicate 27.5546038587825
Replicate 37.8818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310453.p1 GENE.S_Transcript_310453~~S_Transcript_310453.p1 ORF type:3prime_partial len:192 (-),score=38.19,FHA|PF00498.22|2.5e+03,FHA|PF00498.22|1.9e-16 S_Transcript_310453:3-575(-)
ATGTACGGGAAGGCAGGTGTTCTTGATAGATTTAAGAAAGCTCAAACCTTGGAGCCCTTCTCCGTTGATCTTACACAGTCACAACCGAAGCAGGTCTCAAGCTCAGCTGCTGCTACTGCTAAACAACCACCGGTGTCCCAGTCCCAAATTCATAGTTATCGTCACCAACACCAACACCAACACCAACAGCAACAACATTCGGTGGTGGATGTTCGGTCGTCAACAACAACAACTAAAACATCATCATCATCAGCCACTCAACTTGGTGGTTCCCAATCTAATTGGCAGCCTCCTGATTGGGCAATTGAACCTCGTCCTTGTGTCTATTATCTTGAGGTTTTAAAAGACGGAGATATTCTTGATCGGATTCCTCTTCATAAGCGCAGGCACATCTTCGGTAGGCAGTTTCATACTTGTGATTTTGTTCTTGATCATCAGTCTGTTTCCCGTCAACATGCTGCTGTCGTTCCCCACAAAAATGGAAGCATATATGTGATCGATTTGGGATCTGCCCATGGTACCTTTGTTGCCAATGAGAGATTAGCAAAAGATATTCCAGTAGAACTGGAAGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310453.p1 GENE.S_Transcript_310453~~S_Transcript_310453.p1 ORF type:3prime_partial len:192 (-),score=38.19,FHA|PF00498.22|2.5e+03,FHA|PF00498.22|1.9e-16 S_Transcript_310453:3-575(-)
MYGKAGVLDRFKKAQTLEPFSVDLTQSQPKQVSSSAAATAKQPPVSQSQIHSYRHQHQHQHQQQQHSVVDVRSSTTTTKTSSSSATQLGGSQSNWQPPDWAIEPRPCVYYLEVLKDGDILDRIPLHKRRHIFGRQFHTCDFVLDHQSVSRQHAAVVPHKNGSIYVIDLGSAHGTFVANERLAKDIPVELEV

Click here to download the sequence:
Link to NCBI Protein BLAST