Transcript Information: S_Transcript_31054.p2


Annotated TAIR IDAT1G71860.1
Annotated Gene Nameprotein tyrosine phosphatase 1
Annotated Gene Symbol(s)PTP1, ATPTP1
Annotation TypeHomolog
Chromosome Positionchr1:27026866-27028675 | Forward length=340
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65873765433615
Replicate 21.2014390353102
Replicate 31.0043074104931
Condition 2: 8 Hour
Replicate 10.73899867435609
Replicate 21.5505241631494
Replicate 31.7939079667559
Condition 3: 24 Hour
Replicate 11.2977158509264
Replicate 20.5609854350581
Replicate 31.1237544536933


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31054.p2 GENE.S_Transcript_31054~~S_Transcript_31054.p2 ORF type:5prime_partial len:202 (+),score=16.91 S_Transcript_31054:2-607(+)
CCGGGGAAACCAAACACCTATTGGCGTATCATATACGAAGTACGTGAGCAGAGGAGTATCATTATTCTCTTGGCAGCACAGGGAGAGAGAGAGAGAGAGAGACTGACACAAGCAAGCAAAGCAAAACCAATTTCCCTTTCTTTTTTCTTCTCTCTGGAACAACGGGGAACTCCATATCCTCCCGGATTTGTTTCCGGAAGCCACCCCAAAACAAAATGGCTAACCTTGGCAAAACCCTTTCCATATCTCCTCCTCAGGAGCAGGCCTCCAAATCCCTCGATTTATCCTCTTGCGCTGAATCACCTGCCAAGCTTTCTCTCTCCTCTGATCAGCTACAACACTGCTCTCGTGCTCTCCAGCTCTTACTCGACAAATTCCACAATCCCCAAATTATTCGCTCCGAGTTCGACTCTCTCCAGATGGCTTATGTGGAGAACATTTCACTGCCTCCAGCCCCATCCCATCCCATCCCACTGGGGCGATAAAAAGAAAAATCTTGGAACAGATAATGGCACATCACTTTGTGGAACAACTTTATCTTGGGGACATTTTCTGGTGAAATCAACTTCTGCTGCTAATGCACACAGTTGCTTCTCACCTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31054.p2 GENE.S_Transcript_31054~~S_Transcript_31054.p2 ORF type:5prime_partial len:202 (+),score=16.91 S_Transcript_31054:2-607(+)
PGKPNTYWRIIYEVREQRSIIILLAAQGERERERLTQASKAKPISLSFFFSLEQRGTPYPPGFVSGSHPKTKWLTLAKPFPYLLLRSRPPNPSIYPLALNHLPSFLSPLISYNTALVLSSSYSTNSTIPKLFAPSSTLSRWLMWRTFHCLQPHPIPSHWGDKKKNLGTDNGTSLCGTTLSWGHFLVKSTSAANAHSCFSPL*

Click here to download the sequence:
Link to NCBI Protein BLAST