Transcript Information: S_Transcript_310609.p1


Annotated TAIR IDAT5G39670.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15883270-15883884 | Forward length=204
E-Value1.2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70779258604203
Replicate 20.58677631801901
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1133821681116
Condition 3: 24 Hour
Replicate 10.34858856633927
Replicate 20.24110437847178
Replicate 30.13415981066551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310609.p1 GENE.S_Transcript_310609~~S_Transcript_310609.p1 ORF type:5prime_partial len:188 (+),score=44.28,EF-hand_1|PF00036.28|1.1e-08,EF-hand_1|PF00036.28|6.6e-08,EF-hand_6|PF13405.2|1.1e-08,EF-hand_6|PF13405.2|0.00025,EF-hand_5|PF13202.2|5.4e-08,EF-hand_5|PF13202.2|1.8e-05,EF-hand_8|PF13833.2|0.028,EF-hand_8|PF13833.2|1.5e-10,EF-hand_7|PF13499.2|8.3e-13 S_Transcript_310609:2-565(+)
ATAATAGAGCACAAATTTCATAACTCCAACGTTTTGCCAATTTTCTTGATTCTTTATTTACTTCGCATTCTTTTTGACAAGGTATATGGTCCTTCAAGATGTTTTCTCATGATTTCTCCTTCCAGATGTCAATCACAAACTTTTGACAATTCTGAGGTGATTTCTGACCACAATAACAAGAATCATGATTTGGGCAAAAAGGAAACAAATCAAGGTTGTTGTTTGTCAGGACAAGATATGAACATGGTGATTGAAAGAATAGGAATCAAGCACTGTTTGGAAGGAAAAGAGCTACAAAGAAGATGGGGTTTCGAAGATATTTCTGGGCTTTTTGAAGATCAAGAACCAAGCTTGGAAGAAGTTAGAGAAGCTTTTGATGTTTTTGATCAGAACAAAGATGGGTTTATTGATGCTGAGGAATTGCGCAGAGTGCTTTCTGGGTTAGGGTTGAAGCAGGGGTCTGAGCTGCAAACATGCAGCAAGATGATCAGGGTTTATGATGATAATGGAGATGGGAAAATTGATTTTAAGGAGTTTGTGAAGTTTATGTTAGATAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310609.p1 GENE.S_Transcript_310609~~S_Transcript_310609.p1 ORF type:5prime_partial len:188 (+),score=44.28,EF-hand_1|PF00036.28|1.1e-08,EF-hand_1|PF00036.28|6.6e-08,EF-hand_6|PF13405.2|1.1e-08,EF-hand_6|PF13405.2|0.00025,EF-hand_5|PF13202.2|5.4e-08,EF-hand_5|PF13202.2|1.8e-05,EF-hand_8|PF13833.2|0.028,EF-hand_8|PF13833.2|1.5e-10,EF-hand_7|PF13499.2|8.3e-13 S_Transcript_310609:2-565(+)
IIEHKFHNSNVLPIFLILYLLRILFDKVYGPSRCFLMISPSRCQSQTFDNSEVISDHNNKNHDLGKKETNQGCCLSGQDMNMVIERIGIKHCLEGKELQRRWGFEDISGLFEDQEPSLEEVREAFDVFDQNKDGFIDAEELRRVLSGLGLKQGSELQTCSKMIRVYDDNGDGKIDFKEFVKFMLDSF*

Click here to download the sequence:
Link to NCBI Protein BLAST