Transcript Information: S_Transcript_310610.p1


Annotated TAIR IDAT5G39670.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15883270-15883884 | Forward length=204
E-Value9E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97534559500661
Replicate 20.5775599360606
Replicate 30.28967648298849
Condition 2: 8 Hour
Replicate 10.22330251640977
Replicate 20.70278058554115
Replicate 30.89281037088927
Condition 3: 24 Hour
Replicate 11.143711177518
Replicate 20.23731739870521
Replicate 30.39615776552538


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310610.p1 GENE.S_Transcript_310610~~S_Transcript_310610.p1 ORF type:complete len:191 (+),score=43.73,EF-hand_1|PF00036.28|1.8e-08,EF-hand_1|PF00036.28|1.5e-08,EF-hand_6|PF13405.2|3e-08,EF-hand_6|PF13405.2|0.00015,EF-hand_5|PF13202.2|1.4e-07,EF-hand_5|PF13202.2|8e-06,EF-hand_8|PF13833.2|0.0014,EF-hand_8|PF13833.2|2.8e-10,EF-hand_7|PF13499.2|1.3e-12 S_Transcript_310610:356-928(+)
ATGGAGCAAATAATGGAGCACAAATTTCATAATTCTAACGTCTTACCAATTTTCTTGATTCTTTATTTACTTCGCATTCTTTTTGACAAGGTATATGGTCCTTCAAGATGTTTTCTCATGATTTCTCCTTCCAGATGTCAATCACAAACTTTTGACAATTCTGAGGTGATTTCTGAGCATAATAACAAGAATCAGGATTTGGGCAAAAAGGAGACAAATAAAGGTTGTTGTTTGTCAGGACAAGATATGAACATGGTGATTGAAAGAATAGGAATCAAGCACTGTTTGGAAGGAAAAGAGCTACAAAGAAGATGGGGTTTCAAAGATATTTCTGAGCTTTTTGAAGATCAAGAGCCAAGCTTGGAAGAAGTCAGAGAAGCTTTTGAGGTTTTTGATCAGAACAAAGATGGGTTTATTGATTCTGAGGAATTGCAAAGAGTGCTTTCCGGGTTAGGGTTGAGGCAGGGGTCTGAGCTGCAAACTTGCAGCAAGATGATCAGGGTCTATGATGTTAATGGAGATGGAAAAATTGATTTTAAGGAGTTTGTGAAGTTTATGTTAGATAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310610.p1 GENE.S_Transcript_310610~~S_Transcript_310610.p1 ORF type:complete len:191 (+),score=43.73,EF-hand_1|PF00036.28|1.8e-08,EF-hand_1|PF00036.28|1.5e-08,EF-hand_6|PF13405.2|3e-08,EF-hand_6|PF13405.2|0.00015,EF-hand_5|PF13202.2|1.4e-07,EF-hand_5|PF13202.2|8e-06,EF-hand_8|PF13833.2|0.0014,EF-hand_8|PF13833.2|2.8e-10,EF-hand_7|PF13499.2|1.3e-12 S_Transcript_310610:356-928(+)
MEQIMEHKFHNSNVLPIFLILYLLRILFDKVYGPSRCFLMISPSRCQSQTFDNSEVISEHNNKNQDLGKKETNKGCCLSGQDMNMVIERIGIKHCLEGKELQRRWGFKDISELFEDQEPSLEEVREAFEVFDQNKDGFIDSEELQRVLSGLGLRQGSELQTCSKMIRVYDVNGDGKIDFKEFVKFMLDSF*

Click here to download the sequence:
Link to NCBI Protein BLAST