Transcript Information: S_Transcript_310654.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value1.7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.024204685816
Replicate 20.7521405530971
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 10.72700194262953
Replicate 20
Replicate 30.2422255409657
Condition 3: 24 Hour
Replicate 11.7376611867518
Replicate 20.25754331336758
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310654.p1 GENE.S_Transcript_310654~~S_Transcript_310654.p1 ORF type:internal len:88 (+),score=14.27,UFC1|PF08694.7|3.8e-12 S_Transcript_310654:2-262(+)
TCAGGCGAAAAACCCAGCTCCTCCAATTCCTCCCTTCCCTTCACACTCCGGCTGTCAGGCGAGGAATCTTCAGTCAGGCGACGTTCGTCCAGCGGCACCACCCTCACCATTGCTGCCTTCCCACTTCCAAGTTCAGGCCCTAGGTTTGGAATAGCTCATGCTCTCTGTTTTGGTCTTGCCCCATGGCTTGCGGCCGAGATTCCTATTCTCGTGGATTCTGGAATGATCAAGCACAGGGATGATGCTGCAACTTATAGCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310654.p1 GENE.S_Transcript_310654~~S_Transcript_310654.p1 ORF type:internal len:88 (+),score=14.27,UFC1|PF08694.7|3.8e-12 S_Transcript_310654:2-262(+)
SGEKPSSSNSSLPFTLRLSGEESSVRRRSSSGTTLTIAAFPLPSSGPRFGIAHALCFGLAPWLAAEIPILVDSGMIKHRDDAATYSN

Click here to download the sequence:
Link to NCBI Protein BLAST