Transcript Information: S_Transcript_310788.p1


Annotated TAIR IDAT2G37230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15637177-15639450 | Reverse length=757
E-Value1.8E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8805761044132
Replicate 21.8425027681865
Replicate 32.2115486524232
Condition 2: 8 Hour
Replicate 12.7398788416017
Replicate 22.9222329058315
Replicate 32.0083453846235
Condition 3: 24 Hour
Replicate 12.0114132550226
Replicate 22.2324097055931
Replicate 31.8362944534774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_310788.p1 GENE.S_Transcript_310788~~S_Transcript_310788.p1 ORF type:3prime_partial len:467 (-),score=113.33,PPR_2|PF13041.2|0.08,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|7.2e-07,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|1.4e-20,PPR_2|PF13041.2|2.9e-19,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|0.042,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.51,PPR|PF01535.16|0.042,PPR|PF01535.16|9.4e-11,PPR|PF01535.16|1e-09,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.036,PPR|PF01535.16|0.036,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.63,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|2.5e-15,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|5.3e-09,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|2.4e-06,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|1.6,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|0.18,TPR_19|PF14559.2|0.65,TPR_19|PF14559.2|9.9,TPR_14|PF13428.2|7.3e+02,TPR_14|PF13428.2|8.7e+03,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|6.4e+03,TPR_14|PF13428.2|10,TPR_14|PF13428.2|24,TPR_14|PF13428.2|61,TPR_11|PF13414.2|22,TPR_11|PF13414.2|84,TPR_11|PF13414.2|4.7e+02,TPR_11|PF13414.2|60,TPR_11|PF13414.2|81,TPR_11|PF13414.2|0.059,TPR_11|PF13414.2|6.1e+02,TPR_12|PF13424.2|38,TPR_12|PF13424.2|8.4e+02,TPR_12|PF13424.2|3.2e+02,TPR_12|PF13424.2|82,TPR_12|PF13424.2|2 S_Transcript_310788:3-1400(-)
ATGCCAAGAACTCTGAACATGCCCTTCAGTTTTTTTAGGTGGGTTGAAAGGTCTGGTTTATTTAAACATGACAGAGAAACTCATATAAAGATTATTGAGAGATTAGGGAGAGGTTTAAAGCTTAACCATGCTAGGTGTATTTTGATGGATATGCCCAATAAGGGTGTTGAATGGGATGAAGATATGTTTGTTGTGTTGATTGATAGTTATGGTCAAAAGGGTATTGTTCAGGAATCTGTGAAAATATTTCAGCAAATGAAGGAACTTGGCGTGCAAAGATCTGAGAAATCTTATGATGCTTTGTTTAAGGTCATACTTCGTCGTGGGCGGTATATGATGGCTAAGAGGTACTATAATAAGATGTTGGAAGAAGGGATTGCTCCTACTAAGCATACCTTTAATGTGCTCTTGTGGGGTTTCTTTCTTTGTCAGAAACTCGATACTGCAAGTAGGTTTTATGAGGATATGAGAAGTAGAGGGATTATGCCTGACGTGGTTACGTATAACACGTTGATTAATGGGTATTGTCGGGTTAAGAAGATTGAGGAGGCCGAGAAGTTTTTTGTGGAGATGAAGGGGAAGAATATTGCTCCTAATGTTATTAGCTATACTACTATGATTAAGGGTTATGTTTCGATGGGTAAAGTGGATGATGCTTTGAGGATGTTTGAGGAGATGAAGGGTTTTGGTATCAAGCCAAATGCTGTTACTTACACCACTTTGTTGCCTGGGCTTTGTGATGCGATGAAAATGTCTGAGGCTCAGATGGTGTTGAAGGAGATGGTGGAGAAGCATACTGCTCCCAGGGATAATTCAATTTTTATTAAGTTGTTAACATGCCAGTGCAAGTTGGGGAACTTGGATGCAGCTGTTGATGTTCTTAAAGCTATGATTAGACTGGGCATTCCAACAGAGGCTGGACACTATGGGGTTTTAATTGCGAATCTCTGCAAGGCCGAGTCCTATGAGCAGGCGCTGAAATTGTTGGATAAGCTTATGGAGAAAGAAATCATCCTGAGGCCACAAAGCACCTTGGAAATGAAGGCCAACACTTACAATGCAATCATAGAATATCTTTGCAACAGTGGTCAGACTAAAAAAGCTGAAACTCTCTTTAGGCAGCTGATGAAAAAGGGTGTCCAGGATTCAGTTGCTTTCAATAACTTGATATGTGGGCACTCAAAAGAGGGCAACCCTGAAGCTGCTTTTGAAATGTTGAAGATCATGATCAGGAGAGGGGTGGCTTCTGAAGCAGATGCTTACGAGTTGCTCATCCATAGTTTCTTGGAGAAAGGTGAACCAGCTGATGCCAAAATGGTTCTTGATAGCATGATCGAGAACAGCCACTTGCCTGGTTCTTCTGTGTTCAGGACAATTATTGAGGATCTGTTTAAGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_310788.p1 GENE.S_Transcript_310788~~S_Transcript_310788.p1 ORF type:3prime_partial len:467 (-),score=113.33,PPR_2|PF13041.2|0.08,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|7.2e-07,PPR_2|PF13041.2|1.2e-10,PPR_2|PF13041.2|1.4e-20,PPR_2|PF13041.2|2.9e-19,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|0.042,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.51,PPR|PF01535.16|0.042,PPR|PF01535.16|9.4e-11,PPR|PF01535.16|1e-09,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.036,PPR|PF01535.16|0.036,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.63,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|2.5e-15,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|5.3e-09,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|2.4e-06,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|1.6,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|0.18,TPR_19|PF14559.2|0.65,TPR_19|PF14559.2|9.9,TPR_14|PF13428.2|7.3e+02,TPR_14|PF13428.2|8.7e+03,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|6.4e+03,TPR_14|PF13428.2|10,TPR_14|PF13428.2|24,TPR_14|PF13428.2|61,TPR_11|PF13414.2|22,TPR_11|PF13414.2|84,TPR_11|PF13414.2|4.7e+02,TPR_11|PF13414.2|60,TPR_11|PF13414.2|81,TPR_11|PF13414.2|0.059,TPR_11|PF13414.2|6.1e+02,TPR_12|PF13424.2|38,TPR_12|PF13424.2|8.4e+02,TPR_12|PF13424.2|3.2e+02,TPR_12|PF13424.2|82,TPR_12|PF13424.2|2 S_Transcript_310788:3-1400(-)
MPRTLNMPFSFFRWVERSGLFKHDRETHIKIIERLGRGLKLNHARCILMDMPNKGVEWDEDMFVVLIDSYGQKGIVQESVKIFQQMKELGVQRSEKSYDALFKVILRRGRYMMAKRYYNKMLEEGIAPTKHTFNVLLWGFFLCQKLDTASRFYEDMRSRGIMPDVVTYNTLINGYCRVKKIEEAEKFFVEMKGKNIAPNVISYTTMIKGYVSMGKVDDALRMFEEMKGFGIKPNAVTYTTLLPGLCDAMKMSEAQMVLKEMVEKHTAPRDNSIFIKLLTCQCKLGNLDAAVDVLKAMIRLGIPTEAGHYGVLIANLCKAESYEQALKLLDKLMEKEIILRPQSTLEMKANTYNAIIEYLCNSGQTKKAETLFRQLMKKGVQDSVAFNNLICGHSKEGNPEAAFEMLKIMIRRGVASEADAYELLIHSFLEKGEPADAKMVLDSMIENSHLPGSSVFRTIIEDLFKD

Click here to download the sequence:
Link to NCBI Protein BLAST