Transcript Information: S_Transcript_311051.p1


Annotated TAIR IDAT4G19440.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10602006-10604483 | Reverse length=825
E-Value9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.919283298757
Replicate 24.8403058723119
Replicate 34.6106840209001
Condition 2: 8 Hour
Replicate 15.1681430615501
Replicate 25.250535905242
Replicate 35.1658304144725
Condition 3: 24 Hour
Replicate 14.4581394878764
Replicate 23.931477518346
Replicate 33.6031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_311051.p1 GENE.S_Transcript_311051~~S_Transcript_311051.p1 ORF type:3prime_partial len:392 (+),score=67.51,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|8.5,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|1.2e-13,PPR_2|PF13041.2|8.7e-16,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|5.7e-08,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|8.3e-07,PPR_1|PF12854.3|7.4e-12,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|1.2e-11,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|7,PPR|PF01535.16|0.0001,PPR|PF01535.16|5.2e-09,PPR|PF01535.16|0.00097,PPR|PF01535.16|5.8e-09,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0005,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.17 S_Transcript_311051:308-1480(+)
ATGCGCGCCCCTACTATGGACTTGAGAAGGGTCTCCATCATCAAACCCACTTTCTACTTCTCTTCAGCTATACGCCCCCTTCGCTCGGCCCCACCGAAACCTAAACCTAAACCTAAACCTGTGGGGGACCCACCTCCACATCATCTTCAACCTCAACCTTTTGATCATGGCTTTGTCAAATGGGTTTCTTCAGTTCTATCAAGCCCATCTTTGGATTCCTCTAAATGTAAAGAAATTCTTACCAAGTTATCTCCTATACAATTTGATCATCTCTTTTTTCAGATTGGAATATTTGCTAATCCCATAGCTGTCTTGCGTTTCTTTTATTTCGGGTCTCAATCATGTGGGTATTCTTTTAGTGTTAAATCTTATTGTGGGTTGATTCGTTTACTTCTTTCTAAGAATTTGTTTGCCCCTGCTAGATTGCTTTTGATTAGATTGATTGATGGCAAAATGCCTGCTTCGTTTGATAGTGATGTTAGTTTGAGACATGTTGAGATTGCCAGGGCTATGGTGGATTTGAGTGCCGGTTCGAAATATTCGGTTGGGGTTGCTACATTTGATTTGTTGGTTCATGTTTATTGTACTCAAATCAAGAATGCTGGGTTTGGTTTGGCTTTTGATGTGCTTGGGTTTTTGGCTGTGCGGGGCGTTTCCCCCTCTTTGAAAGCTTGTAACATCTTTTTGAGCTCGCTCCTTAAGGCTGGCGAGCTTGAGAGGGGTTATCAAGCATTTCAGATTATGTGCCGAGGGGTTAAGCCTGATGTTTATCTATATACCACTGCCATCAACTTGTTTTTCAAAGGTGGGAGGGTTAAGGATGCTGTGGGGTTGTTTTTCAAAATGGAGAAGCAAGGGATTTTGCCCTCCATTGTGACTTACAACAGTGTCCTGAATGGACTTTGCCAGTGCGGGGATTTAGATGAGGCATTCCAGTTCAAAGAGAGGATGGTAGAGAATGGTATCATCCCAAATATAACAACTTATGGCACTTTCATTAACGGTTTAGTTAAGCGTGAGAGATTTGATGAGGCTCATTACATGTTACAAGAATTGTTAGATAAGGGTCTTGTTGTTAATGACATTGTTTACAATACTTTGATTGATGGGTATTGTAGAGTAGGAAGAGTTGTTGAGGCTTTGAAGATAAAAGATGAGATGTTACGAATGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_311051.p1 GENE.S_Transcript_311051~~S_Transcript_311051.p1 ORF type:3prime_partial len:392 (+),score=67.51,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|8.5,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|1.2e-13,PPR_2|PF13041.2|8.7e-16,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|5.7e-08,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|8.3e-07,PPR_1|PF12854.3|7.4e-12,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|1.2e-11,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|7,PPR|PF01535.16|0.0001,PPR|PF01535.16|5.2e-09,PPR|PF01535.16|0.00097,PPR|PF01535.16|5.8e-09,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0005,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.17 S_Transcript_311051:308-1480(+)
MRAPTMDLRRVSIIKPTFYFSSAIRPLRSAPPKPKPKPKPVGDPPPHHLQPQPFDHGFVKWVSSVLSSPSLDSSKCKEILTKLSPIQFDHLFFQIGIFANPIAVLRFFYFGSQSCGYSFSVKSYCGLIRLLLSKNLFAPARLLLIRLIDGKMPASFDSDVSLRHVEIARAMVDLSAGSKYSVGVATFDLLVHVYCTQIKNAGFGLAFDVLGFLAVRGVSPSLKACNIFLSSLLKAGELERGYQAFQIMCRGVKPDVYLYTTAINLFFKGGRVKDAVGLFFKMEKQGILPSIVTYNSVLNGLCQCGDLDEAFQFKERMVENGIIPNITTYGTFINGLVKRERFDEAHYMLQELLDKGLVVNDIVYNTLIDGYCRVGRVVEALKIKDEMLRMG

Click here to download the sequence:
Link to NCBI Protein BLAST