Transcript Information: S_Transcript_311052.p1


Annotated TAIR IDAT4G19440.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10602006-10604483 | Reverse length=825
E-Value6E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16950956200752
Replicate 20.28105464404477
Replicate 30.46987862633377
Condition 2: 8 Hour
Replicate 10.81498306944457
Replicate 20.71247925604225
Replicate 30.27153945993607
Condition 3: 24 Hour
Replicate 10.41741815587123
Replicate 20.14435548774744
Replicate 30.64259985745519


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_311052.p1 GENE.S_Transcript_311052~~S_Transcript_311052.p1 ORF type:3prime_partial len:157 (-),score=26.14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|1e-15,PPR_2|PF13041.2|3.6e-06,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|0.18,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|0.00086,PPR_1|PF12854.3|3.1e-12,PPR_1|PF12854.3|9.7e-06,PPR|PF01535.16|0.59,PPR|PF01535.16|9.4e-09,PPR|PF01535.16|0.00025,PPR|PF01535.16|4e-10,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1 S_Transcript_311052:3-434(-)
ATGGAGAAGCAAGGGATTTTGCCCTCCATTGTGACTTACAACAGTGTCCTGAATGGACTTTGCCAGTGCGGGGATTTAGATGAGGCATTCCAGTTCAAAGAGAGGATGGTAGAGAATCGTATCATCCCAAATATAACAACTTATGGCACTTTCATTAACGGTTTAGTTAAGCGTGAGAGATTTGATGAGGCTCATTACATGTTACAAGAATTGTTAGATAAGGGTCTTGTTGTTAATGACATTGTTTACAATACTTTGATTGATGGGTATTGTAGAGTAGGAAGAGTTGTTGAGGCTTTGAAGATAAAAGATGAGATGTTACGAATGGGAATATCGCCTAATTCATCGTCCTATCATTCGCTTCTACATGGCTTTTGCCAAAGTAATATGGCTGAGAAAGCTTCACTGCTGTTGCAGGATATGCTTTCGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_311052.p1 GENE.S_Transcript_311052~~S_Transcript_311052.p1 ORF type:3prime_partial len:157 (-),score=26.14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|1e-15,PPR_2|PF13041.2|3.6e-06,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|0.18,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|0.00086,PPR_1|PF12854.3|3.1e-12,PPR_1|PF12854.3|9.7e-06,PPR|PF01535.16|0.59,PPR|PF01535.16|9.4e-09,PPR|PF01535.16|0.00025,PPR|PF01535.16|4e-10,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1 S_Transcript_311052:3-434(-)
MEKQGILPSIVTYNSVLNGLCQCGDLDEAFQFKERMVENRIIPNITTYGTFINGLVKRERFDEAHYMLQELLDKGLVVNDIVYNTLIDGYCRVGRVVEALKIKDEMLRMGISPNSSSYHSLLHGFCQSNMAEKASLLLQDMLSR

Click here to download the sequence:
Link to NCBI Protein BLAST