Transcript Information: S_Transcript_311482.p1


Annotated TAIR IDAT1G52620.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19603828-19606287 | Forward length=819
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.53811681847597
Replicate 30.674734246961
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27638794605302
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_311482.p1 GENE.S_Transcript_311482~~S_Transcript_311482.p1 ORF type:3prime_partial len:82 (+),score=9.86,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|2e-13,PPR_1|PF12854.3|5.5e-09,PPR_1|PF12854.3|1.3e-14,PPR_1|PF12854.3|5.3e+02,PPR|PF01535.16|4.3e-07,PPR|PF01535.16|8.8e-11,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|3.7e-06 S_Transcript_311482:175-417(+)
ATGTTAAAGAGACGACTCTCTCCAGATGAGTTTACTTATTCTACACTAATAGATGGTTATGTGAAGCAGCATGACTTGAATAATGCATCGACAATGTTCAGAGAGATGGTAGAAAGTAAATGTAAACCAAACATAGTTACATACACATCTCTTATTAATGGATATTGCCGTCAAGGAAATACTTCTGAAGCTGAAAAAAAATTCAGCGAGATGCAGTCTCTTGGTCTGGTCCCTAATGTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_311482.p1 GENE.S_Transcript_311482~~S_Transcript_311482.p1 ORF type:3prime_partial len:82 (+),score=9.86,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|2e-13,PPR_1|PF12854.3|5.5e-09,PPR_1|PF12854.3|1.3e-14,PPR_1|PF12854.3|5.3e+02,PPR|PF01535.16|4.3e-07,PPR|PF01535.16|8.8e-11,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|3.7e-06 S_Transcript_311482:175-417(+)
MLKRRLSPDEFTYSTLIDGYVKQHDLNNASTMFREMVESKCKPNIVTYTSLINGYCRQGNTSEAEKKFSEMQSLGLVPNVI

Click here to download the sequence:
Link to NCBI Protein BLAST