Transcript Information: S_Transcript_3116.p1


Annotated TAIR IDAT1G22630.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8003487-8004167 | Forward length=110
E-Value4.1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5967800741108
Replicate 20.66188368672544
Replicate 31.106564165016
Condition 2: 8 Hour
Replicate 10.63976170951399
Replicate 22.2371848639727
Replicate 32.3447432365479
Condition 3: 24 Hour
Replicate 11.3106930094356
Replicate 21.1331905788174
Replicate 32.7744248845628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3116.p1 GENE.S_Transcript_3116~~S_Transcript_3116.p1 ORF type:5prime_partial len:100 (-),score=3.58 S_Transcript_3116:43-342(-)
CTAAAACCCGTGGGAGCTATGCCTCGAACCCGGGTGGTGAGGGAGGAAGCCAAGCTTCCCACCACTCCACTCCGCATTCTTCGGCTTAAATTACAGTTTCTCAATATGACAGTTGGTAGAAAGAGAATGTTGGAGCCTATATCTATCTTTCTCCCCTTTGTTCCGGTGTTAAGCCGCCTTTTCCACATTCCGGGCAGCTCTTCAATCCGAATCCCTGGCATTCAAAACACTTCCATCGCTCGAAAATATTCCCATTCTTCTTGTTATTTCCTGTCCCCTAAATGTCACAATATAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3116.p1 GENE.S_Transcript_3116~~S_Transcript_3116.p1 ORF type:5prime_partial len:100 (-),score=3.58 S_Transcript_3116:43-342(-)
LKPVGAMPRTRVVREEAKLPTTPLRILRLKLQFLNMTVGRKRMLEPISIFLPFVPVLSRLFHIPGSSSIRIPGIQNTSIARKYSHSSCYFLSPKCHNIT*

Click here to download the sequence:
Link to NCBI Protein BLAST