Transcript Information: S_Transcript_31160.p1


Annotated TAIR IDAT3G47160.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17360238-17361879 | Reverse length=257
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.19268811840624
Replicate 30.88589561973627
Condition 2: 8 Hour
Replicate 12.7005952803356
Replicate 23.6146655007418
Replicate 34.7471975015461
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31160.p1 GENE.S_Transcript_31160~~S_Transcript_31160.p1 ORF type:complete len:229 (+),score=40.35,zf-C3HC4_3|PF13920.2|7e-09,zf-RING_2|PF13639.2|1e-07,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|1.5e-06,Prok-RING_4|PF14447.2|1e-05,zf-RING_5|PF14634.2|1.5e-05 S_Transcript_31160:1936-2622(+)
ATGACTGTGTATGAAAAGAAAGCAAGCATTAAGCAATTTTATGGTGAGTTTCAAATTGAGAAACTCATTCCCAGCCGAAGTCAATGTGCAAACTATTTGTCCCTTTGTTTCTTGCTCTTTTCATTGGCCCCTGCTGCTGAATATTTCCTTTCTCCTCTTTTCCCCAAGTTCAGTTTGCAGGTGTGTGATTCATATTTGTTGACTATTCAACATGCTGATGTTTCTGTATCTTTCTGCTTAGGTGTGATATTCCCCTCTCTGCTGCAACTTGAAAGCGGAATTACAGAATTGGACGACAGGAAACAAAAAGAATTGTTCTTGTCGAGGTATAGAAGAAAAGACCAGTCCAAAAGGTGTGAATTCACGGAACTGGAGAAAGAGATGGAGGAGGAGTGTGGTATTTGCATGGAGGTCAGCAACAAGGTTGTCCTGCCTAATTGCAGCCATTCCCTGTGCTTGAAGTGCTACCAGGACTGGTCTGCCCGGTCTCAGTCATGCCCTTTCTGTCGAGATAGACTCAACCAAGTCAAGCCTGATGATGTTTGGGTTTTCACTGATGATCGTGACATTGTTGATTTGTCCATTATAAAGAAGGAGAATGTAAACAGGCTATTTATCTACTTAGATAATTTGCCACAAATGGATCCATATTCTGAGTCCATATCATATGGTTGGCAAATCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31160.p1 GENE.S_Transcript_31160~~S_Transcript_31160.p1 ORF type:complete len:229 (+),score=40.35,zf-C3HC4_3|PF13920.2|7e-09,zf-RING_2|PF13639.2|1e-07,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|1.5e-06,Prok-RING_4|PF14447.2|1e-05,zf-RING_5|PF14634.2|1.5e-05 S_Transcript_31160:1936-2622(+)
MTVYEKKASIKQFYGEFQIEKLIPSRSQCANYLSLCFLLFSLAPAAEYFLSPLFPKFSLQVCDSYLLTIQHADVSVSFCLGVIFPSLLQLESGITELDDRKQKELFLSRYRRKDQSKRCEFTELEKEMEEECGICMEVSNKVVLPNCSHSLCLKCYQDWSARSQSCPFCRDRLNQVKPDDVWVFTDDRDIVDLSIIKKENVNRLFIYLDNLPQMDPYSESISYGWQIS*

Click here to download the sequence:
Link to NCBI Protein BLAST