Transcript Information: S_Transcript_311724.p1


Annotated TAIR IDAT3G61470.1
Annotated Gene Namephotosystem I light harvesting complex gene 2
Annotated Gene Symbol(s)LHCA2
Annotation TypeOrtholog
Chromosome Positionchr3:22745736-22747032 | Forward length=257
E-Value8.9E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1449.90640670813
Replicate 2497.54196293482
Replicate 3522.93143808697
Condition 2: 8 Hour
Replicate 1210.73515628348
Replicate 2196.94273054499
Replicate 3219.36860487961
Condition 3: 24 Hour
Replicate 1517.22491855289
Replicate 2493.0717431925
Replicate 3443.0738666757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_311724.p1 GENE.S_Transcript_311724~~S_Transcript_311724.p1 ORF type:5prime_partial len:127 (-),score=17.76,Chloroa_b-bind|PF00504.17|2.2e-17 S_Transcript_311724:40-420(-)
GCCGAGGGTAGAAGATGGGCCGACATCATCAAGCCCGGTTGTGTCAACACTGACCCAATTTTCCCCAACAACAAGCTTACTGGTACTGATGTGGGCTACCCTGGGGGGCTTTGGTTTGATCCATTGGGCTGGGGCTCCGGCTCGCCCGAAAAGGTTAAGGAGTTGAGGACTAAGGAGATCAAGAATGGTAGGTTGGCCATGTTGGCTGTAATGGGTGCTTGGTTTCAACACATCTACACTGGGACTGGCCCAATTGACAACCTCTTTGCCCACCTTGCTGATCCTGGCCATGCCACAATTTTTGCTGTAAGTATATACTTCCTCCGTTTTAAAATGAGTTATGTATTTACTCAAGAGGTGTCTCGTTCACTGGTAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_311724.p1 GENE.S_Transcript_311724~~S_Transcript_311724.p1 ORF type:5prime_partial len:127 (-),score=17.76,Chloroa_b-bind|PF00504.17|2.2e-17 S_Transcript_311724:40-420(-)
AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSIYFLRFKMSYVFTQEVSRSLVN*

Click here to download the sequence:
Link to NCBI Protein BLAST