Transcript Information: S_Transcript_31182.p1


Annotated TAIR IDAT5G67100.1
Annotated Gene NameDNA-directed DNA polymerases
Annotated Gene Symbol(s)ICU2
Annotation TypeOrtholog
Chromosome Positionchr5:26776994-26785104 | Forward length=1524
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7052708530322
Replicate 24.989362867255
Replicate 34.2550887826869
Condition 2: 8 Hour
Replicate 15.7703997328713
Replicate 26.7846652083877
Replicate 38.7492498666198
Condition 3: 24 Hour
Replicate 11.1707715334828
Replicate 22.562640132489
Replicate 33.1980892905833


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31182.p1 GENE.S_Transcript_31182~~S_Transcript_31182.p1 ORF type:complete len:1530 (+),score=362.59,DNA_pol_B|PF00136.17|8.4e-124,zf-DNA_Pol|PF08996.6|6.3e-45,DNA_pol_B_exo1|PF03104.15|4.4e-28,DNA_pol_B_exo1|PF03104.15|8.5e+02,DNA_pol_alpha_N|PF12254.4|6.3e-18,DNA_pol_alpha_N|PF12254.4|1.6e+04,DNA_pol_alpha_N|PF12254.4|5.9e+03 S_Transcript_31182:1523-6112(+)
ATGGAAGACGAAGAACAGCAAACAGCAGCCGGAAGACGGCGAACCAGGGCCACAACCACCAACCCTAGAGCCCAAGCCCTAGAGCGTCTCAAAGCCCTTCGCAACGGAGAGCGCCGCCCTTCCTATGACCTCAAGATCGAAACCCCTATATACGACACCGTCGACGAAGACGAATACAAAACCCTAGTCGCCAAGCGCCGCGAGGAGTTCAGCGACTTCATCGTCGGTGAGGCCGGCGACGGCTACCTCGACGACGGCGAGGAAGAAGACTGGACTAAGGCCGGCGTTCCTTTCTCCTCCGACGAGGATTCTGATGGCGGCAACGAGTTCGGGAAATCGAAGAGAAAGAAAGCCGACAAGGAGAAGGATTCTGAGAAGAAACCTAGAGCTTCTGCTGCTTCTAATGCTCTTGCTAATGCTGCTGCTTCTTTGATGGGGAAACAACGGATCTCGTCGATGTTTACTTCGTCGGTGTTTAAGAAGAGGAATGAAGATAAGGCTCGAGGCGGCCTGGTTAGTGATAGTGTTGTTGATGATGTTCTTGCAGAGTTTGCTCCTGATCAGGTTGATAGGGAGAAAAGGAGGAGATTTCAATCCAAGAACTCAGGGTTAGGGTTAGGGTTGAGTAATGGTGTTAAGATTGAGAAGAAGGAAGATAACCACAGACCTCATTCGATTGATTTAGTTCCGAAAAATGTGGCTAGAGTTGAAGAGAAGGTAGCTTTGAAGGCGGTTGAAGATAGGGTTGGTTTGGATAATGGCAATGGAGATGTTGGATTGGAGAATTCTATGGATGTCGGGGATCAGAATGAGGATGAGAAATTGGTGGAGGTTGTGAACGAGGAAGCTGAGCCTGAGTTGAAGGTGAAGGAGGAAGGTGAAGAGGCTTCGTTTGCGCTGAATGCAAAAATTAAGGAGGAAAGAATTCAAGCTTTTAGCGCCACCACGGAGTTGCAGGCCATAAAGGGCGTCAAAGATGAAAATGTGGTCGCAGTGGATACAACTGGTGGTTTGGATTCGGAGAAGTCAGATTTTGTGGTGGAGCCTGATGGCTCCTTGCCTTTCTATATTCTTGATGCTCATGAGGAGATTTATGGTATCAATGCTGGCACTGTTTATCTATTTGGTAAAGTCAAAGCTGGAAATGCGTACCACAGCTGCTGTGTTGTAGTAAAGAATATGCAGAGATGTGTTTATGCCATTCCAAATGGTTCTGTTTTCCACAATGAGGTGGTTTTGAAATTGGAAAAAGATGCTACTGGTACTAAGTTATCAGCTGCCTATCGCGCAAAGCTTCATGAAGTGGCATCAGGATTGAAAAGTGAAATTGCAAAGCGTTTGGTGGATCTTAATGTCTCGACATTCAGCATGTCGCCTGTCAAGAGGAAATATGCATTTGAGCGTTTTGACATACCTACCGGAGAGAATTATGTGCTTAAGATCAACTATCCATTCAAGGATCCTCCACTTCCATCGGATCTTAAGGGAGACAACTATTGTGCAGTGCTAGGGACTCGTTCCAGTGCTCTGGAACTCCTCCTGGTTAAGAGGAAGATAAAAGGACCATCTTGGTTGTCAATCTTAAAATTTTCTAGCTGCCCTTCTCATCAAAGGGTGAGCTGGTGCAAGTTTGAGGTTATTGTTGATTGTCCTAAGGACATCCGAGTCTCGTCTTCCACAAGGAATACAGCAGAGATACCTCCGGTGATTGTGACAGCAATCAATTTGAAAACTGTGATCAACGAAAAGCAGAATGTAAATGAAATTGTTTCAGCGTCCATCATCTCTTGTAGCAAAGCCAAGATTGACTCTCCAATGCTGGCTTCAGAGTGGAAGCGACCTGGTGTGCTTAGTCATTTTACAGTTTTAAGAAAGCTCGAAGGAGGTATATTTCCAATGGGATTCAATAAAGAAGCTGTGGAGAAAAATTCAAAGGCAGGAAGTACGATACTGGCTTTTGAGAGCAGTGAAAGAGCTTTGTTGAACCGGCTGATGGCAGAGATGCACAAGTTGGATAGTGATGTCCTTGTTGGCCATAACATTTCAGGATTTGATCTTGATGTTCTCCTCCACCGAGCTCAGGCATGCAGAGTACCAAGCAGCATGTGGTCTAAAATTGGTCGTCTTAAAAGATCTACAATGCCTAAGCTCACCAAGGGAAGCACCATCTTTGGTTCAGGAGCAAGTCCTGGAATTATGTCTTGTATTGCTGGTCGTGTCTTGTGTGATACGTATCTGTGTTCGCGTGACCTCTTAAAAGAGGTGAGCTACTCATTGACAGAGCTAGCAAAGACTCAGCTGAACAAGGAGCGCAAAGAGATTGCCCCACGTGATATTCCTAGAATGTATCAAGCAACTGAGTCCCTTATGAACCTTATAGAATGCAATGAGACAGATGCATGGTTGTCTATGGAACTCATGTTTCATTTGAGTGTTCTTCCACTCACACGTCAGCTGACTAATATTAGTGGCAACCTTTGGGGAAAGACTCTACAAGGTGCTAGAGCACAACGGGTGGAGTATCTTCTATTACATGCTTTTCATGCTAAGAAGTATATTGTTCCCGACAAACATTCTTTTCGTGAAAAGGAAAGCAAAATGTCAAAACGTAAAATGGATCCTGATGTTGAAGTGGCTATGGATGACACAAATTTTGATACCACAGCTCCGCATGAAGATCCCGTGAAAGGCAAGAAAGGTCCAGCTTATGCTGGTGGGTTGGTTTTGGAACCAAAAAAGGGTTTATATGACAAATATGTGTTGCTTTTGGACTTCAATAGTCTTTATCCTTCTATCATTCAGGAGTACAATATTTGTTTTACAACAGTTGAAAGATATCCTGATGGATCAGTTCCCCGTTTACCATCTTTTGAGAAAACAGGAGTTCTCCCAGAGTTGCTTAAAAGTTTGGTGGAAAGAAGGAGATCAGTTAAAAAATGGCTTAAGGAAGCAACAGGTCTCAAGGCCCAGCAGTTTGACATACAACAGCAAGCACTTAAGCTCACTGCAAACAGTATGTATGGATGCCTGGGTTTTTCCAACTCAAGATTTTATGCAAAGCCACTTGCAGAACTTATAACACTACAGGGGAGAGAGATTTTGCAAACTACTGTCGACCTTGTGCAGAACATCTTGAACTTGGAGGTTATATATGGTGATACAGATTCAATCATGATATATAGTGGACTTGATGATATTGCAAAGGCCCAGGCCATGGCAGGGAAGGTCATCAAAGAGGTTAATAAGAAATATAGGTGCTTAGAAATTGATCTGGATGGGTTGTACAAGAGAATGCTGCTTCTCAAGAAGAAGAAGTACGCAGCTGTAAAATTACAGTTCAGGGGTGATAAAGCATATGAGGTAATTGAAAGGAAAGGTCTTGATATGGTACGTCGTGACTGGAGCTTGTTAGCTAAGGAACTTGGAGACTTCTGCCTGAGCCAGATACTTTCTGGAGGGTCTTGTGAGGATGTTGTGGAATCAATACACGATTCACTTAAGAAGGTGCAAGAGGAGATGAGAAATGGAGAAGTAGCTCTTGAAAAATATATCATCACAAAATCATTGACAAAACAACCTGAAGCATATCCTGATGCCAAAAATCAACCACACGTCCAGGTGGCATTGAGATTGAAACAGAATGGTTACACTACTGGTTGTTCTGCTGGCGACACAGTCCCATATATTATTTGCTGCGAGCAGGGGGCTAATTCAGCGGCTTCAACTGGTATTGCTCAGCGTGCTAGGCATCCTGATGAATTGAGAAGGGACAATTCAACTTGGATGATTGACATTGATTATTACCTGTCTCAGCAGATTCATCCAGTGGTTTCACGTTTATGCGCATCCATCCAGGGTACAGACCCTGCACGTTTAGCAGACTGTTTGGGGCTTGATACCTCTAAGTTTCAAATTAAATCAAGTGACAGCACCAGCAATGATCCTTCCAGCTTGTTGTTGTGCTCGATTGATGATGAGGAGAGGTATCAAGGTTGCGAGACTTTAAGCTTATCTTGCCCCAGTTGTTCAAGCACTTTTGACTGCCCAAGTGTTTTTAGTTCCTTATGTAAACCAATGTCCAAGGAGAAGGAGCGAGAGGAAGCTACTTGGAGTATCTGGAAAAGATTGCGTTGCCCAAAGTGCCCAGAGGAAGGGGATGTTGGTAGAATCTCTCCTGCGATGATTGCTAATCAGGTCAAGAGGCAAGCAGATAGATTCATAGCAATGTACTACAGGGGTTTAATGATGTGTGATGATGAAACTTGCAAGTACACTACACGTAGCATTAATCTACGGGTAATAGGTGACTCTGAGAGAGGAACAATCTGTCCAAATTACCCTCGCTGTAATGGTCGTCTAGTACGAAAGTATTCAGAGGTGGATCTATACAAGCAGCTGACATATTTCTGTTATATACTAGACACAGTTCGATGTGTGGACAAGGTGGATGTAAATGCAAGACAACCACTGGAAAAAGAGCTCACTAGAGTCCGACCCATGGTTGATTTAGCAGCTGATATAGCTCAGAAGTTGCAAGACCGCTGTGCTTATGGGTGGGTGCAACTGAATGATCTCTTTGTCACAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31182.p1 GENE.S_Transcript_31182~~S_Transcript_31182.p1 ORF type:complete len:1530 (+),score=362.59,DNA_pol_B|PF00136.17|8.4e-124,zf-DNA_Pol|PF08996.6|6.3e-45,DNA_pol_B_exo1|PF03104.15|4.4e-28,DNA_pol_B_exo1|PF03104.15|8.5e+02,DNA_pol_alpha_N|PF12254.4|6.3e-18,DNA_pol_alpha_N|PF12254.4|1.6e+04,DNA_pol_alpha_N|PF12254.4|5.9e+03 S_Transcript_31182:1523-6112(+)
MEDEEQQTAAGRRRTRATTTNPRAQALERLKALRNGERRPSYDLKIETPIYDTVDEDEYKTLVAKRREEFSDFIVGEAGDGYLDDGEEEDWTKAGVPFSSDEDSDGGNEFGKSKRKKADKEKDSEKKPRASAASNALANAAASLMGKQRISSMFTSSVFKKRNEDKARGGLVSDSVVDDVLAEFAPDQVDREKRRRFQSKNSGLGLGLSNGVKIEKKEDNHRPHSIDLVPKNVARVEEKVALKAVEDRVGLDNGNGDVGLENSMDVGDQNEDEKLVEVVNEEAEPELKVKEEGEEASFALNAKIKEERIQAFSATTELQAIKGVKDENVVAVDTTGGLDSEKSDFVVEPDGSLPFYILDAHEEIYGINAGTVYLFGKVKAGNAYHSCCVVVKNMQRCVYAIPNGSVFHNEVVLKLEKDATGTKLSAAYRAKLHEVASGLKSEIAKRLVDLNVSTFSMSPVKRKYAFERFDIPTGENYVLKINYPFKDPPLPSDLKGDNYCAVLGTRSSALELLLVKRKIKGPSWLSILKFSSCPSHQRVSWCKFEVIVDCPKDIRVSSSTRNTAEIPPVIVTAINLKTVINEKQNVNEIVSASIISCSKAKIDSPMLASEWKRPGVLSHFTVLRKLEGGIFPMGFNKEAVEKNSKAGSTILAFESSERALLNRLMAEMHKLDSDVLVGHNISGFDLDVLLHRAQACRVPSSMWSKIGRLKRSTMPKLTKGSTIFGSGASPGIMSCIAGRVLCDTYLCSRDLLKEVSYSLTELAKTQLNKERKEIAPRDIPRMYQATESLMNLIECNETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKHSFREKESKMSKRKMDPDVEVAMDDTNFDTTAPHEDPVKGKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERYPDGSVPRLPSFEKTGVLPELLKSLVERRRSVKKWLKEATGLKAQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQTTVDLVQNILNLEVIYGDTDSIMIYSGLDDIAKAQAMAGKVIKEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFRGDKAYEVIERKGLDMVRRDWSLLAKELGDFCLSQILSGGSCEDVVESIHDSLKKVQEEMRNGEVALEKYIITKSLTKQPEAYPDAKNQPHVQVALRLKQNGYTTGCSAGDTVPYIICCEQGANSAASTGIAQRARHPDELRRDNSTWMIDIDYYLSQQIHPVVSRLCASIQGTDPARLADCLGLDTSKFQIKSSDSTSNDPSSLLLCSIDDEERYQGCETLSLSCPSCSSTFDCPSVFSSLCKPMSKEKEREEATWSIWKRLRCPKCPEEGDVGRISPAMIANQVKRQADRFIAMYYRGLMMCDDETCKYTTRSINLRVIGDSERGTICPNYPRCNGRLVRKYSEVDLYKQLTYFCYILDTVRCVDKVDVNARQPLEKELTRVRPMVDLAADIAQKLQDRCAYGWVQLNDLFVTV*

Click here to download the sequence:
Link to NCBI Protein BLAST