Transcript Information: S_Transcript_311859.p1


Annotated TAIR IDAT4G19003.2
Annotated Gene NameE2F/DP family winged-helix DNA-binding domain
Annotated Gene Symbol(s)VPS25
Annotation TypeOrtholog
Chromosome Positionchr4:10407571-10408582 | Reverse length=179
E-Value1.6E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.602200631314
Replicate 211.399107938049
Replicate 312.602536323794
Condition 2: 8 Hour
Replicate 110.899643939868
Replicate 218.394631103775
Replicate 313.144772689739
Condition 3: 24 Hour
Replicate 18.7379533962377
Replicate 25.0364025725216
Replicate 312.330777264723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_311859.p1 GENE.S_Transcript_311859~~S_Transcript_311859.p1 ORF type:complete len:180 (+),score=39.24,ESCRT-II|PF05871.8|6.4e-43 S_Transcript_311859:305-844(+)
ATGCAGAAATTGGGGGATTTCAAGCTGCCGAATTTCTTCAATTACCCTCCTTATTTGACTTTGCAGCCAGTTAGGGAAACCAGAGAGAAGCAGATCCTGCTCTGGAAGGAACTGATACTTGAATACTGCAGAAGTCAGAAGATTTTTGTTATCAATCTAGAAGAAGACTTCCCTCTATTCTCAAATTCAGTGATCGAGAGATCGCTCAGTCATGAAGCGAGGGAAGCGTTTTTGTCAGCCTTAGTTGCTGAAGGACGTGCAGAATGGATGGGCAAGGCCCATAGGAAATGCCTTGTTCTTTGGCACCGGATTCAAGAATGGGCAGAGATCATCCTGCGTTTTGTCAAGGATAATGGATTGGATGATAGTGTCATGACAGTTGAAGAACTACGTACAGGGGTTGAATCCCGAGGAACAGAGCTTCATGGGATGGACCGCACTGTTCTAGTACGAGCTTTAAAGCTCCTAGAGAACAAGGGAAAGCTTGCATTATTTAAAGGAACCTCTACTGATGATGATGGTGTGAAGTTCTCTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_311859.p1 GENE.S_Transcript_311859~~S_Transcript_311859.p1 ORF type:complete len:180 (+),score=39.24,ESCRT-II|PF05871.8|6.4e-43 S_Transcript_311859:305-844(+)
MQKLGDFKLPNFFNYPPYLTLQPVRETREKQILLWKELILEYCRSQKIFVINLEEDFPLFSNSVIERSLSHEAREAFLSALVAEGRAEWMGKAHRKCLVLWHRIQEWAEIILRFVKDNGLDDSVMTVEELRTGVESRGTELHGMDRTVLVRALKLLENKGKLALFKGTSTDDDGVKFSV*

Click here to download the sequence:
Link to NCBI Protein BLAST