Transcript Information: S_Transcript_312082.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16950956200752
Replicate 20.70263661011194
Replicate 30.35240896975033
Condition 2: 8 Hour
Replicate 10.54332204629638
Replicate 20.14249585120845
Replicate 30.27153945993607
Condition 3: 24 Hour
Replicate 10
Replicate 20.14435548774744
Replicate 31.606499643638


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312082.p1 GENE.S_Transcript_312082~~S_Transcript_312082.p1 ORF type:internal len:157 (+),score=8.68,gag_pre-integrs|PF13976.2|5.9e-12,gag_pre-integrs|PF13976.2|2.5e+03 S_Transcript_312082:2-469(+)
AAACCTCACCCACCTCTCTCCCTTCGTAATGTACAAATAGCCCCTCACATTATTAAAAACCTGATATCTGTTAGACAGTTCACCACATACAATAATGTCTTTGTTACTTTTGACCCGTTTGGTTTTTCTGTGAAGGACCTTCGAGCAGGGACAACCTTGATGCGGTGCAATAGTACGGGCTCCCTTTATCCTCTCTCCCGTGGCTCTAGCTCTCTTGCGTCTGTGTCGTTGGTCACTGTCTCCCCAGATTACTGGCATTATCGTCTTGGGCATCCTGCAGCTCCTATTCTTTCTGCTCTAAATTCTTCTCACTTAATTCAATGTAATAAGGGGAATAGCCCCACTTTCTGCTCTTCATGTCAATTAGGAAAACATTCCCGTTTGCCATTTTATCCCTCTAAAAATGTAACTCATGCCCCCTTTGATATTATTCATAGTGATTTGTGGCATTCACCGATTAAAAGCTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312082.p1 GENE.S_Transcript_312082~~S_Transcript_312082.p1 ORF type:internal len:157 (+),score=8.68,gag_pre-integrs|PF13976.2|5.9e-12,gag_pre-integrs|PF13976.2|2.5e+03 S_Transcript_312082:2-469(+)
KPHPPLSLRNVQIAPHIIKNLISVRQFTTYNNVFVTFDPFGFSVKDLRAGTTLMRCNSTGSLYPLSRGSSSLASVSLVTVSPDYWHYRLGHPAAPILSALNSSHLIQCNKGNSPTFCSSCQLGKHSRLPFYPSKNVTHAPFDIIHSDLWHSPIKSS

Click here to download the sequence:
Link to NCBI Protein BLAST