Transcript Information: S_Transcript_312594.p1


Annotated TAIR IDAT5G35695.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13869120-13869941 | Forward length=211
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6316694718532
Replicate 26.6512821460155
Replicate 38.1365012133532
Condition 2: 8 Hour
Replicate 110.976303839701
Replicate 212.008418755147
Replicate 310.657923802491
Condition 3: 24 Hour
Replicate 111.08306588861
Replicate 28.6655750144858
Replicate 310.200091487363


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312594.p1 GENE.S_Transcript_312594~~S_Transcript_312594.p1 ORF type:5prime_partial len:136 (-),score=20.66,DDE_Tnp_4|PF13359.2|1.4e-11,Plant_tran|PF04827.10|1.1e-09 S_Transcript_312594:37-444(-)
TTGAACTTATGGCAAGGGAATACTCCACAAAATTATAAGGAGCTCTTTAATCTAAAACATTCATCCGCTCGAAACACAATTGAACGTGTGTTTGGATTGTTAAAGAAAAGGTGGGCTATCTTGAGGACCTCGAGCTTTTTTGAGAAAAGGACCCAAATTCGGATTATCAATGCTTGTTTTGTTCTTCACAATTTTATACGAGATGAAAACATGGAAGAGGATCACATATTACATGCGGTGGATCATGAACTACAACAAGAGGAGGGACTTGATAATGAAGAACAAGAAGATGATTACATATCATGCGTTAAAGGAACGGAGGAATGGGATAAATTTCGAGATGATCTTGCTAAGAAGATGTTTAATGATTATCAAGCTCATAGAGAGCTGATTAGGACATTTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312594.p1 GENE.S_Transcript_312594~~S_Transcript_312594.p1 ORF type:5prime_partial len:136 (-),score=20.66,DDE_Tnp_4|PF13359.2|1.4e-11,Plant_tran|PF04827.10|1.1e-09 S_Transcript_312594:37-444(-)
LNLWQGNTPQNYKELFNLKHSSARNTIERVFGLLKKRWAILRTSSFFEKRTQIRIINACFVLHNFIRDENMEEDHILHAVDHELQQEEGLDNEEQEDDYISCVKGTEEWDKFRDDLAKKMFNDYQAHRELIRTFD*

Click here to download the sequence:
Link to NCBI Protein BLAST