Transcript Information: S_Transcript_312600.p1


Annotated TAIR IDAT5G54970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22313271-22313648 | Forward length=125
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4993240132496
Replicate 21.087602302131
Replicate 30.51951369249579
Condition 2: 8 Hour
Replicate 10.15017880505023
Replicate 20.15754822985723
Replicate 30.60044641140792
Condition 3: 24 Hour
Replicate 10.15383720768024
Replicate 20
Replicate 30.35524006204389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312600.p1 GENE.S_Transcript_312600~~S_Transcript_312600.p1 ORF type:5prime_partial len:142 (+),score=2.12 S_Transcript_312600:3-428(+)
CCCCTCCATTTCATTCCACACATTTTTACCCACAAAAAATCCTCCCTTCAATTATTCGGTTTTCTTCCTCATAATCTCCTCCCCTCCTTTCCAAAAATGAAAAGGAAGATCCGAGTCAACTCGCCCTGGACTCACCGATTCAGTAAGTACTTAAAGCCCGGCGACCTGGCCCGCCTCAGGGACTCCCGGTTTCTCGCCGCCAGATCATCCCGACTCGTCTTCTCCACCACCACCACCACTCACCGAGTCGACTCGGAAACCACCCCGAGTCCCCAGACCGAGTCACTCCCCGAGTTCCCGAGTTTGGATTTTGGGCCCAGATGTTTTGGTAGAAAGAAGCTTGTTGCTGCTAAAAGGGTTTTCTCTAGTATTACTATAAACCCTGTATCAGACCCTAATACTAATAGTAATCTACTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312600.p1 GENE.S_Transcript_312600~~S_Transcript_312600.p1 ORF type:5prime_partial len:142 (+),score=2.12 S_Transcript_312600:3-428(+)
PLHFIPHIFTHKKSSLQLFGFLPHNLLPSFPKMKRKIRVNSPWTHRFSKYLKPGDLARLRDSRFLAARSSRLVFSTTTTTHRVDSETTPSPQTESLPEFPSLDFGPRCFGRKKLVAAKRVFSSITINPVSDPNTNSNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST