Transcript Information: S_Transcript_312601.p1


Annotated TAIR IDAT4G26960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54970.1); Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13538923-13539653 | Reverse length=156
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4220687682921
Replicate 21.0105094453824
Replicate 30.14078424491298
Condition 2: 8 Hour
Replicate 10.81394619531042
Replicate 20.68310988212906
Replicate 30.48814918179347
Condition 3: 24 Hour
Replicate 10
Replicate 20.17300619523929
Replicate 30.19253469011539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312601.p1 GENE.S_Transcript_312601~~S_Transcript_312601.p1 ORF type:5prime_partial len:131 (+),score=9.12 S_Transcript_312601:2-394(+)
AAAAAATCCCCCCTTCAGTTATTCAGTTTTATTCCTCATAATCTCCTCCCCTACTTTCCAAAAATGAAAAGGAAGATCCGAGTCAACTTCCCCAGGACTCACCGATTCAGCAAGTACATAAAGCCCGGTGACCTGGCCCGCCTTAGGGACTCCAGGTTCCTCGCCGCCAGATCATCCCAACTCGTCGTCTCCACCACCACCACCACTCACCGAGTTGACTCAGAGACCACCCCGAGTCCCCAGACCGACTCACTCCCCGAGTTTCCGAGTTTGGATTTTGGGCCCAGATGTTTTGGTAGAAAGAAGCTTGTTGCTGCTAAAAGGGTTTTCTCTAGTATTACTATAAACCCTGTATCAGACCCTAATACTAATAGTAATCTACTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312601.p1 GENE.S_Transcript_312601~~S_Transcript_312601.p1 ORF type:5prime_partial len:131 (+),score=9.12 S_Transcript_312601:2-394(+)
KKSPLQLFSFIPHNLLPYFPKMKRKIRVNFPRTHRFSKYIKPGDLARLRDSRFLAARSSQLVVSTTTTTHRVDSETTPSPQTDSLPEFPSLDFGPRCFGRKKLVAAKRVFSSITINPVSDPNTNSNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST