Transcript Information: S_Transcript_312666.p2


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74441961497008
Replicate 20
Replicate 30.2579403648056
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.14906187136351
Condition 3: 24 Hour
Replicate 10.45828426903344
Replicate 20.15848819284159
Replicate 30.35275586580582


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312666.p2 GENE.S_Transcript_312666~~S_Transcript_312666.p2 ORF type:complete len:143 (+),score=25.85,zf-RVT|PF13966.2|3.5e-13 S_Transcript_312666:923-1351(+)
ATGATAAGAAAGATCTTGGAGTGCAGGGAGATTGTGCAGGGACCTCAGGTAGAGGATTCAGAGAGCAAAGGCATAAAAAAGATGTATCTAAACTTGCGAGGGGAATTTCCAAAGGTAGATTGGTGTAAAGTCATTTGCAGAAATTTGGCCAGGCCAAAAGCAGTGATGTCTCTGTGGTTGTTTATGCTGCAGAGACATGTTACCACAGACAGGATGGAGAAATGGGGGATAGTTGTGAACAGGGAATGCTGCCTTTGTAAAGATAAATTGGAAAGTCACACTCACCTTTTGTTTGAATGTTCCTACACACTCAGTATGGAAGCAAACACTGGAGATATTCAGGATACTCAAGCAAGGGGATGTGCAGATCAGAGACTGGCAGCAGGGCATTCAATGGATTGTAGAGAGAGGAAAAGGCAAGGGTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312666.p2 GENE.S_Transcript_312666~~S_Transcript_312666.p2 ORF type:complete len:143 (+),score=25.85,zf-RVT|PF13966.2|3.5e-13 S_Transcript_312666:923-1351(+)
MIRKILECREIVQGPQVEDSESKGIKKMYLNLRGEFPKVDWCKVICRNLARPKAVMSLWLFMLQRHVTTDRMEKWGIVVNRECCLCKDKLESHTHLLFECSYTLSMEANTGDIQDTQARGCADQRLAAGHSMDCRERKRQGW*

Click here to download the sequence:
Link to NCBI Protein BLAST