Transcript Information: S_Transcript_312829.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14867598455408
Replicate 21.3558138834227
Replicate 30.5151602257989
Condition 2: 8 Hour
Replicate 12.8592702101184
Replicate 22.2496831034362
Replicate 32.1434930552495
Condition 3: 24 Hour
Replicate 11.0983460972924
Replicate 20.50645388997424
Replicate 31.4090527600623


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_312829.p1 GENE.S_Transcript_312829~~S_Transcript_312829.p1 ORF type:complete len:179 (-),score=45.25 S_Transcript_312829:175-711(-)
ATGAAGTCCAACACTAGGCTTGATTCTATTGTCTTCCAGCTCACTCCCACTAGAACCAGGTGTGATCTAGTTATCACTGCTAATGGGAAAACTGAGAAGATTGCTTCAGGTTTGTTGAACCCTTTCCTAGCCCATTTGAAGGCAGCTCAGGATCTGATTGGGAAGGGAGGATATTCTATTATCCTTGAACCAAAGCAAGGAAGTGAGGCACCATGGTTTACCAAGGGAACTGTAGAAAGGTTTGTTCGTTTTGTGAGTACTCCAGAGATCCTTGAGCGCGTGTACACAATAGAATCTGAAATCTTACAGATTGAAAAGGCAATTTCTGTTCAGAACAGTTGTGAAACGGGGGTGCATACTCAGGTAGAAGATATTCCAGCAAAGTCTGAGGATAACATTGAAGGCAGCAAACCTGCACTGGGTGGTAATGAGGAGAAAGCAATTGTGCTTTACCAGCCTGTCAGCGATCAACAAGAGGATGATGATTCTAACATGCAGGAAAAAAAATTTAAAAGTTCAACTTGTACGAGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_312829.p1 GENE.S_Transcript_312829~~S_Transcript_312829.p1 ORF type:complete len:179 (-),score=45.25 S_Transcript_312829:175-711(-)
MKSNTRLDSIVFQLTPTRTRCDLVITANGKTEKIASGLLNPFLAHLKAAQDLIGKGGYSIILEPKQGSEAPWFTKGTVERFVRFVSTPEILERVYTIESEILQIEKAISVQNSCETGVHTQVEDIPAKSEDNIEGSKPALGGNEEKAIVLYQPVSDQQEDDDSNMQEKKFKSSTCTSS*

Click here to download the sequence:
Link to NCBI Protein BLAST