Transcript Information: S_Transcript_313357.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value4E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 31.0059674227419
Condition 2: 8 Hour
Replicate 10
Replicate 21.6270435374347
Replicate 32.7775195364067
Condition 3: 24 Hour
Replicate 10
Replicate 20.6181039520822
Replicate 30.38215218795631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_313357.p1 GENE.S_Transcript_313357~~S_Transcript_313357.p1 ORF type:5prime_partial len:330 (-),score=43.87,SURNod19|PF07712.8|1.5e-132 S_Transcript_313357:35-1024(-)
AGAATCGATCCCCCTTGTAGAAACATACATGCACCATTGGGCAGTTTTCAGATACTATGTCAACCAGAAAATCATTCAGATTTGATACTTGTCAGGAACAGTGGAGTTTGCCCTGATAATCTTCTTGGGCAGTATTTTGGGATGGGTTCTGAAACCCGGAAAACTGACACACATGTTCCCGACCCTTATGCCATCGAAGTAGGAAACCCTTCGGAAGTTCCACAAGGGTATGCAGAAGGATGGCTTCTTAACGTTCATGCAATTGATCTACGTGGTGTGGTGAACAGGACAGCTTGCACAGAGTGCAGGTGTAGCTTTTACAATGTAACCAAAGACGAGACTGGAAAGCCCTTGAAGCCCGGCTATGAAGGGGGATTCCACTGTTGCTATAATCAGACACATTGTATAGTAAAAGAAGGTGTTGCCCCCTCACCGAGGAGGGTATACTTGAGGTACACTGTCAAGTGGGTTGATTGGGATCAATCTGTGCTGCCTGTCAGGTTTTATATCTTGGATGTTACTGACACCACAACGACATCCATAAGTTCTGTCGCACCTACAAAGCATCACTGCAAGATTGAGTATGAAGTCAAGCCTTGTAAATATACCGATGGTAAAGCGTGTATGGACACCAAAAGGACAAAAATTGTTATTCCAAAAGGTGGCTATGTGGTTTATGGTGTTGGCCTTCAGTACCCAGGAGGAATTGGTGCATCTCTTTATAGAAAGGATGGACAGGTGATCTGTTCCTCGAAGCCGATATATGGGAAGGGGACGGAAGTAGGAAATGAGGCTGGATATATCGTTGGAATGTCAACCTGTTATCCTCAACCAGGCTCTGTACATATATCAGATGGAGAAACCGTGGTTCTTGAATCCAACTATAACAGTTCTGCAGAACACCCTGGTGCTGCTGGTTTTATCAAAATTATGGTTGCTGATCAAGCACCTAAGGACAAAAGCTTTTTCGAGAGCCTCAAAGTTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_313357.p1 GENE.S_Transcript_313357~~S_Transcript_313357.p1 ORF type:5prime_partial len:330 (-),score=43.87,SURNod19|PF07712.8|1.5e-132 S_Transcript_313357:35-1024(-)
RIDPPCRNIHAPLGSFQILCQPENHSDLILVRNSGVCPDNLLGQYFGMGSETRKTDTHVPDPYAIEVGNPSEVPQGYAEGWLLNVHAIDLRGVVNRTACTECRCSFYNVTKDETGKPLKPGYEGGFHCCYNQTHCIVKEGVAPSPRRVYLRYTVKWVDWDQSVLPVRFYILDVTDTTTTSISSVAPTKHHCKIEYEVKPCKYTDGKACMDTKRTKIVIPKGGYVVYGVGLQYPGGIGASLYRKDGQVICSSKPIYGKGTEVGNEAGYIVGMSTCYPQPGSVHISDGETVVLESNYNSSAEHPGAAGFIKIMVADQAPKDKSFFESLKVN*

Click here to download the sequence:
Link to NCBI Protein BLAST