Transcript Information: S_Transcript_313873.p1


Annotated TAIR IDAT2G23840.1
Annotated Gene NameHNH endonuclease
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10153982-10155600 | Reverse length=284
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1170.74003804498
Replicate 2203.88144085077
Replicate 3210.20275102513
Condition 2: 8 Hour
Replicate 1365.61482435277
Replicate 2340.2946856344
Replicate 3350.55580699759
Condition 3: 24 Hour
Replicate 1193.44565500707
Replicate 2261.31647805499
Replicate 3192.20413356911


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_313873.p1 GENE.S_Transcript_313873~~S_Transcript_313873.p1 ORF type:internal len:166 (-),score=15.26,Hydrophob_seed|PF14547.2|2.4e+03,Hydrophob_seed|PF14547.2|1.3e-19 S_Transcript_313873:2-496(-)
CATGAATTCCAGACATATAGCACGCTTCCAGCAGACAACATTGACAGGTCTGTAAGAAATGTCAAGAACCAAACCCCCCAAAAAAAACCCTTACAAAAACAAAAGAACCCACCAACATTCTATCATACTAAGCTCTTAGCCATGGCTACCACCACCAAGCTCATTGCCACCCTTCTCATTTTCTCTCTCCTCTCCGTCTCGCCGCTTTGCCATGCTTGTTGCTCCGGTTGCACCCCCTCCACACCATCCACCCCTTCGACACCATCCACCCCCTCCACCCCGGCTCCTGGTCCAGCTAAATGCCCCATTGATGCCCTTAAGCTCGGCGTTTGCGCCGATGTCTTAGGGCTTGTGCATGCCGTTGTAGGCAAACCACCTTCTGGTGCTCCTTGTTGTACTCTTCTCAAAGGATTGGCTAACTTAGAGGCGGCTGCGTGCCTTTGCACTGTCCTTAAGGCCACTGTTCTTGGTGTTAACCTCAACGTCCCTATCGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_313873.p1 GENE.S_Transcript_313873~~S_Transcript_313873.p1 ORF type:internal len:166 (-),score=15.26,Hydrophob_seed|PF14547.2|2.4e+03,Hydrophob_seed|PF14547.2|1.3e-19 S_Transcript_313873:2-496(-)
HEFQTYSTLPADNIDRSVRNVKNQTPQKKPLQKQKNPPTFYHTKLLAMATTTKLIATLLIFSLLSVSPLCHACCSGCTPSTPSTPSTPSTPSTPAPGPAKCPIDALKLGVCADVLGLVHAVVGKPPSGAPCCTLLKGLANLEAAACLCTVLKATVLGVNLNVPIA

Click here to download the sequence:
Link to NCBI Protein BLAST