Transcript Information: S_Transcript_313921.p2


Annotated TAIR IDAT1G27850.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9699265-9703701 | Forward length=1148
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6512378551144
Replicate 23.5852033030962
Replicate 34.8412182219451
Condition 2: 8 Hour
Replicate 12.1325390317133
Replicate 22.5168329719692
Replicate 34.2631695209963
Condition 3: 24 Hour
Replicate 15.4612208726485
Replicate 22.8329764470434
Replicate 30.94582666519185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_313921.p2 GENE.S_Transcript_313921~~S_Transcript_313921.p2 ORF type:5prime_partial len:80 (+),score=13.70 S_Transcript_313921:1-240(+)
GTCACGATTCCAGAAAAACGTAACTCGAACAGAAGGGAACCTCCTGCCACTACTACTGGTAGGGCGACAAAACCTCGAAAAGCCAGAAAGAGGCACGCAGAAACAGAGGCGAAGCCTCCTCTTGCAAACAACGACAAGAAGACTAATGAACCTGTGGGTCGTAATGTTGGGCTTCCTAACAGTGGCGATAGCATGAAACCCCCAAAGTTGGAATCCAAGTGCAACTGCACAATAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_313921.p2 GENE.S_Transcript_313921~~S_Transcript_313921.p2 ORF type:5prime_partial len:80 (+),score=13.70 S_Transcript_313921:1-240(+)
VTIPEKRNSNRREPPATTTGRATKPRKARKRHAETEAKPPLANNDKKTNEPVGRNVGLPNSGDSMKPPKLESKCNCTIM*

Click here to download the sequence:
Link to NCBI Protein BLAST