Transcript Information: S_Transcript_31394.p1


Annotated TAIR IDAT5G58100.1
Annotated Gene Nameunknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23507828-23514863 | Forward length=945
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.922170782375
Replicate 222.594701674729
Replicate 321.458529405447
Condition 2: 8 Hour
Replicate 130.803341569192
Replicate 231.400320050937
Replicate 331.214087111278
Condition 3: 24 Hour
Replicate 127.500739069396
Replicate 222.711324808164
Replicate 321.99658379985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31394.p1 GENE.S_Transcript_31394~~S_Transcript_31394.p1 ORF type:complete len:954 (+),score=180.30 S_Transcript_31394:135-2996(+)
ATGGCGTCCAATGGCGGATCCTTCACGCCACTTCCACCACATCTACACTTCCGCACGCTCTCCCGTCTCTCTTTCCTCCTCTTCTTCACTCTTCTACTGGCATCTGTCCCTGAGTCACTTGGATCTCCAGCACATCGTAAAAGTGGGACGTCTTCTGTGTTTTCTTTGTTCAATCTCAAAGAAAAGAGCAGGTTCTGGACTGAGTCTATCATACATGGTGATTTTGATGATTTGGGATCTTCAACCCCTGGAAAGAGTGGGGCTCTCAACTACTCCAAGGCAGGTAATATTGCCAATTATTTGAAGCTCCAGGAAGTTGATTCTATGTATCTTCCCGTGCCTTTGAACTTTATTTTTATTGGATTTGAAGGCAAAGGAAATGAAGGTTTTAAGCTGCAAGCTGAAGAAATGGAGCGCTGGTTCACAAAAATTGATCATATCTTTGAGCATACACGGGTTCCACAAATTGAAGAAGTGTTGAGCCCATTTTACAAGATCAATATTGATAAAGGGAATCACCATTTTCCAACCTTAAGCCTTGTAAACTACAATTTTTCTGTTCATGCCATACAAATGAACGAAAAGGTGACTTCTGTTTTTGAACGTGCCATTGCTGTCTTATCTCGGAAGGATGACGTCTCAGGGTCAGGGGATGGTAAAGAGGCTTTCTGGCAAGTGGACCTGGATATGATGGAAGTTCTTTTTGATAGTCTTGTTGAGTATTTACAAGTTGGAAATGCATACAACATTTTCATTTTGAACCCAAAGCATGATCTCAACAGGACTAGATACGGTTATAGGAGAGGATTGTCTGATTCAGAGATAGACTTTCTAAAACAGAATAAGAGCTTGCAGGCTAAAATACGTGAATCAGGAAGTGTTTCAGAGATTACTCTTGCAATTGAAAAGATACAAAGGCCTCTATATGGAAAACACCCAATGGTTAAGTTTGCTTGGACAACTACTGAAGAAACTGATACGATAGAATGGTCTAATACATGTTTAGAAGCTCTAAATAATATTGAGAAGTTATATGAAGGAAAGGACACAGATTACATCATTCAGAGCAAAGCTCTACAGGTGTTGAATGGGAGGAGTGGAAATCTAAAAATTACTCTGGGAAAGGAGCTGAAATCTGGGGACCTCAGTGGCCTTCATGCTGAATGTCTGACAGATACTTGGATAGGAAAAGACAGGTGGGCATTTATTGATCTAAGTGCCGGCCCTTTTACATGGGGTCCTGCTGTTGGAGGGCAGGGTGTTCGTACGGACCAATGTTTGCCAAATGTGACGAAAACAATTGGTGCTGTTGCAGAGATTTCAGAAGAGGAAGCAGAAGATCGCTTACAGGATGCAATCCAGGAAAGATTTGCTGTTTTTGGGGATAGAGAACATGAGGCGATTGACATCCTGCTTGCTGAAATTGATATTTATGAGCTTTTTGCTTTTAAGCATTGCAAAGGGAGAAGAGTTAAGCTTGCCCTTTGTGAAGAACTTGATCAAAGAATGCACGAACTGAGGAATGAGCTCCAGGGCTTGGAAGGGGATGATTATGATGAAAATCATAGGAGAAAAGCATTAGACGCGTTAAAGCGAATGGAGAGCTGGAATCTATTCAGTGATACCGCTGAGGAGTTCCAAAGCTACACTGTTGCTCGTGATACCTTTCTGGCTCATTTAGGTTCAGTCTTGTGGGGATCCATGAGGCACATTATAGCGCCGTCCGTGGCTGATGGAGCATTTCATTTCTATGAGCAGATATCTTATCAGTTATTTTTCATCACACAGGATAAAGTCAGGAGTGTCAAGCATTTGCCTGTAGATCTGAGGGCTTTAATGGACAGGCTATCTTCTTTGTTGCTTCCTTCTCAGAAAGTCATGTTTAGCCAGCACATGTTGCCACTTTCTGAAGATCCTGCTTTAGCGATGGCTTTCTCAGTGGCGCGTCGAGCAGCAGCTGTGCCGATGTTGTTTGTTAATGGAACATATAGAAAAACTGTCTCGAACTATCTTGATTCCTCCATTCTCCAATACCAGCTACGGAGGCTCAATGATCATGGCACACTTAAAGGAACACATGCCAATAGCAGATCCACACTTGAGGTTCCAATTTTCTGGTTTATCCATGCTGATCCATTGCTGGTTGACAAGCATTACCAAGCAAAAGCACTTTCGGATATGATCGTTGTTGTTCAGTCAGAATCCTCATCCTGGGAAAGTCATTTCCAGTGTAATGGGCAGTCAATACTTTGGGATTTAAGGAGGCCCATAAAAGCTGCTATTGCTGCCGCTTCTGAACATTTAGCTGGTTTGCTTCCTCTACATCTTGTCTACAGCCATGCTCATGAAACTGCTATTGAGGATTGGATATGGTCAGTTGGCTGCAACCCTTTTTCAATCACCTCTCAAGGTTGGCGTATCTCTCAGTTTCACTTGGACACAATTGCCCGCAACTATATTATCACTAGTCTGGAGGAATCTATCCAGCTAGTAAACTCAGCCATTCACCGTCTTGTCCTGGAGCAGACAACTCAAAAATCATTTAAGCCTTTTCAGTCCCAGGAGAGAGAGCTTGTGAACAAGTATAATCTTGTTATCGGCCTGTGGAGAAGAATAGCTACTGTTACTGGGGAGTTGCGTTATGTTGATGCCTTAAGGCTTCTGTACACCTTGGATGACGGATCCAGACGCTTTGCCGAGCAAGTGAACTCTACAATAGCTCTGCTTCATCCAATACACTGCACAAAAGAAAGGAAGGTGGAGGTGGTCTTTGACATGACAACAATTCCTGCTTTCTTGGTTGTCTTGTTGATCCTATGGATAGTTTTAAAACCGAAGCGAGCAAAGCCTAAGATTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31394.p1 GENE.S_Transcript_31394~~S_Transcript_31394.p1 ORF type:complete len:954 (+),score=180.30 S_Transcript_31394:135-2996(+)
MASNGGSFTPLPPHLHFRTLSRLSFLLFFTLLLASVPESLGSPAHRKSGTSSVFSLFNLKEKSRFWTESIIHGDFDDLGSSTPGKSGALNYSKAGNIANYLKLQEVDSMYLPVPLNFIFIGFEGKGNEGFKLQAEEMERWFTKIDHIFEHTRVPQIEEVLSPFYKINIDKGNHHFPTLSLVNYNFSVHAIQMNEKVTSVFERAIAVLSRKDDVSGSGDGKEAFWQVDLDMMEVLFDSLVEYLQVGNAYNIFILNPKHDLNRTRYGYRRGLSDSEIDFLKQNKSLQAKIRESGSVSEITLAIEKIQRPLYGKHPMVKFAWTTTEETDTIEWSNTCLEALNNIEKLYEGKDTDYIIQSKALQVLNGRSGNLKITLGKELKSGDLSGLHAECLTDTWIGKDRWAFIDLSAGPFTWGPAVGGQGVRTDQCLPNVTKTIGAVAEISEEEAEDRLQDAIQERFAVFGDREHEAIDILLAEIDIYELFAFKHCKGRRVKLALCEELDQRMHELRNELQGLEGDDYDENHRRKALDALKRMESWNLFSDTAEEFQSYTVARDTFLAHLGSVLWGSMRHIIAPSVADGAFHFYEQISYQLFFITQDKVRSVKHLPVDLRALMDRLSSLLLPSQKVMFSQHMLPLSEDPALAMAFSVARRAAAVPMLFVNGTYRKTVSNYLDSSILQYQLRRLNDHGTLKGTHANSRSTLEVPIFWFIHADPLLVDKHYQAKALSDMIVVVQSESSSWESHFQCNGQSILWDLRRPIKAAIAAASEHLAGLLPLHLVYSHAHETAIEDWIWSVGCNPFSITSQGWRISQFHLDTIARNYIITSLEESIQLVNSAIHRLVLEQTTQKSFKPFQSQERELVNKYNLVIGLWRRIATVTGELRYVDALRLLYTLDDGSRRFAEQVNSTIALLHPIHCTKERKVEVVFDMTTIPAFLVVLLILWIVLKPKRAKPKIN*

Click here to download the sequence:
Link to NCBI Protein BLAST