Transcript Information: S_Transcript_314032.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeOrtholog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value9.4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12981951822039
Replicate 20.53811681847597
Replicate 30
Condition 2: 8 Hour
Replicate 10.31207888268975
Replicate 20
Replicate 30.20795948882909
Condition 3: 24 Hour
Replicate 10
Replicate 20.22111035684241
Replicate 30.49213745180714


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314032.p1 GENE.S_Transcript_314032~~S_Transcript_314032.p1 ORF type:3prime_partial len:205 (+),score=-25.25,Chloroa_b-bind|PF00504.17|5.7e-29 S_Transcript_314032:70-681(+)
ATGATTGCTCCTACCTGCTCACGCATCAGCGCCAAGGCGCCGGTGGCCGCGCCACGCAGCCGCCGCGCGGTGCACTGTCGCGCGGAAGAGAAGAAGGAGGACAAGAAGGAGCAGCCCAAGGCGCCATCAGCGATGGAGCCCGTGGGCGGCCAGGAACGCACGGGCGCGGCCCTCGGCACTCAGGGCGGCGACCGCAGCGGCGAGAGCCTCTTCTTCCCGACGCAGCAGTCGCTCGCGTACCTCGACGGCAGCTACGCCGGCGACTTCGGCTTTGACCCGCTCGGCCTCTCCGACCCCGACGGCGCCGGCGGCTTCATCAACCCCGAGTGGCTCCGCTACGGCGAGATCATCAACGGCCGCTGGGCGATGCTCGGCGCGGCGGGCTGCGTCGCGCCCGAGGTCCTCGGCGGCCTCGGCGTCATCCCCGACGCGACGAACATCCTCTGGTTCAAGACGTCCGTCTTCCCGCCCGCCGGCACGACGAGCATCTACTGGGCGGACCCCTTCGCGATCTTCTGGGTCGAGGTCGTGCTGATGCAGTTTGCGGAGCTCCGGCGGTGGCAGGACTACCGCAAGCCCGGCAGCATGGGCAAGCAATTCTTCCTTGGCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314032.p1 GENE.S_Transcript_314032~~S_Transcript_314032.p1 ORF type:3prime_partial len:205 (+),score=-25.25,Chloroa_b-bind|PF00504.17|5.7e-29 S_Transcript_314032:70-681(+)
MIAPTCSRISAKAPVAAPRSRRAVHCRAEEKKEDKKEQPKAPSAMEPVGGQERTGAALGTQGGDRSGESLFFPTQQSLAYLDGSYAGDFGFDPLGLSDPDGAGGFINPEWLRYGEIINGRWAMLGAAGCVAPEVLGGLGVIPDATNILWFKTSVFPPAGTTSIYWADPFAIFWVEVVLMQFAELRRWQDYRKPGSMGKQFFLGF

Click here to download the sequence:
Link to NCBI Protein BLAST