Transcript Information: S_Transcript_314033.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeHomolog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14542623625782
Replicate 20.12056169157112
Replicate 30.10077997859891
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.61922982449037
Replicate 30.41347613778879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314033.p1 GENE.S_Transcript_314033~~S_Transcript_314033.p1 ORF type:internal len:183 (+),score=-7.10,Chloroa_b-bind|PF00504.17|1.9e-45 S_Transcript_314033:1-546(+)
GCTCTTACCTCCATGCGCCCGACGGTGGCACGGTCAGCGTGCCCCGTAGCCCGCCGAGGCGTGGCCGCGCACGCCAAGGCTGGCAACTGGCTGCCTGGCGCTGACTCGCCCCCGCATTTGGACGGCTCGCTGCCAGGCGACTACGGCTTCGACCCGTTGAATCTGGGTGCACAAAAGCTGGATCGCCTGCGCGAGTCCGAGCTCGTGCACGGCCGCTGGGCGATGCTCGGCGTCGTTGGCTGCCTGCTGCCAGAGATTCTGGGCTTCGGCGACTGGTTCGAGGCGCCTCTGTGGGCAGTCAACGGTGGCACACCCACGTACTTTGGTGTGCCCGTGCCTGTGGATGTCAAGACCATCATCCTGGTGGAGATCATCGCAATGGCGGGTGTCGAGATCCTTCGGAACGAGGAGAGCGAGCCGATGAAGCGCGCGTACCCAGGTGGTGCGTTCGACCCAATGGGCTTTGGCAAGGACGGCAGCAAGCTCGACAACATGAAGCTGAAGGAGGTCAAGAACGGCCGCCTAGCAATGCTTGCGTTCCTCGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314033.p1 GENE.S_Transcript_314033~~S_Transcript_314033.p1 ORF type:internal len:183 (+),score=-7.10,Chloroa_b-bind|PF00504.17|1.9e-45 S_Transcript_314033:1-546(+)
ALTSMRPTVARSACPVARRGVAAHAKAGNWLPGADSPPHLDGSLPGDYGFDPLNLGAQKLDRLRESELVHGRWAMLGVVGCLLPEILGFGDWFEAPLWAVNGGTPTYFGVPVPVDVKTIILVEIIAMAGVEILRNEESEPMKRAYPGGAFDPMGFGKDGSKLDNMKLKEVKNGRLAMLAFLG

Click here to download the sequence:
Link to NCBI Protein BLAST