Transcript Information: S_Transcript_31416.p1


Annotated TAIR IDAT5G59180.1
Annotated Gene NameDNA-directed RNA polymerase II
Annotated Gene Symbol(s)NRPB7
Annotation TypeOrtholog
Chromosome Positionchr5:23883499-23884976 | Forward length=176
E-Value8.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9899377315963
Replicate 24.136773042034
Replicate 34.466600145247
Condition 2: 8 Hour
Replicate 112.16213666524
Replicate 29.0885635098889
Replicate 39.6587434460072
Condition 3: 24 Hour
Replicate 15.119894568108
Replicate 23.1870985029238
Replicate 38.8671249861736


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31416.p1 GENE.S_Transcript_31416~~S_Transcript_31416.p1 ORF type:complete len:128 (+),score=25.41,SHS2_Rpb7-N|PF03876.13|3.5e-16,S1|PF00575.19|1.4e+04,S1|PF00575.19|4.1e-08 S_Transcript_31416:109-492(+)
ATGTTTTTCCACGTAATACTAGAGAGGAACATGCAGCTTCATCCTCGCCATTTTGGGGCTCGTCTTCGAGACAAACTCGTCTCCAAACTCATGAAAGATGTCGAGGGTACTTGCAGTGGGCGTCATGGATTTGTGGTTGCAATTATGGGAATAGAGAATGTGGGCAAAGGGTTGATCAGGGATGGAACTGGGTTTGTCACTTTCCCTGTCAAATACAAGTGTGTTGTCTTTAGGCCTGTCGAGGGTGAGATTCTTGAAGCTGTTGTTACTATGGTCAACAAGATGGGTTTCTTTGCTGAGGCTGGTCCTGTGCAAATTTTTGTGTCTAATCATCTGATACCAGATGACATGTTAAGATTCAGAAGGACAGCGAAGTGCGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31416.p1 GENE.S_Transcript_31416~~S_Transcript_31416.p1 ORF type:complete len:128 (+),score=25.41,SHS2_Rpb7-N|PF03876.13|3.5e-16,S1|PF00575.19|1.4e+04,S1|PF00575.19|4.1e-08 S_Transcript_31416:109-492(+)
MFFHVILERNMQLHPRHFGARLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIENVGKGLIRDGTGFVTFPVKYKCVVFRPVEGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMLRFRRTAKCG*

Click here to download the sequence:
Link to NCBI Protein BLAST