Transcript Information: S_Transcript_31419.p1


Annotated TAIR IDAT5G59180.1
Annotated Gene NameDNA-directed RNA polymerase II
Annotated Gene Symbol(s)NRPB7
Annotation TypeOrtholog
Chromosome Positionchr5:23883499-23884976 | Forward length=176
E-Value2.3E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.000121531624
Replicate 232.526855461936
Replicate 334.356182647165
Condition 2: 8 Hour
Replicate 136.679671345469
Replicate 237.456866579657
Replicate 333.252722263771
Condition 3: 24 Hour
Replicate 133.703534528345
Replicate 234.060471111882
Replicate 328.681067637818


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31419.p1 GENE.S_Transcript_31419~~S_Transcript_31419.p1 ORF type:3prime_partial len:175 (+),score=33.57,SHS2_Rpb7-N|PF03876.13|7.4e-16,S1|PF00575.19|1.3e-14 S_Transcript_31419:109-630(+)
ATGTTTTTCCACGTAATACTAGAGAGGAACATGCAGCTTCATCCTCGCCATTTTGGGGCTCGTCTTCGAGACAAACTCGTCTCCAAACTCATGAAAGATGTCGAGGGTACTTGCAGTGGGCGTCATGGATTTGTGGTTGCAATTATGGGAATAGAGAATGTGGGCAAAGGGTTGATCAGGGATGGAACTGGGTTTGTCACTTTCCCTGTCAAATACAAGTGTGTTGTCTTTAGGCCTGTCGAGGGTGAGATTCTTGAAGCTGTTGTTACTATGGTCAACAAGATGGGTTTCTTTGCTGAGGCTGGTCCTGTACAAATCTTTGTGTCTAATCATCTGATACCGGATGACATGGAATTCCAATCTGCTGATACACCAAATTATACAACTTCTGATGGATCAGTTAAGATTCAGAAGGACAGTGAAGTGCGGTTAAAAATAATTGGGACCAGAGTAGATGCCACTGAAATTTTTTGCATTGGTACCATTAAAGACGATTTCCTGGGCGTGATCAGTGATCCTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31419.p1 GENE.S_Transcript_31419~~S_Transcript_31419.p1 ORF type:3prime_partial len:175 (+),score=33.57,SHS2_Rpb7-N|PF03876.13|7.4e-16,S1|PF00575.19|1.3e-14 S_Transcript_31419:109-630(+)
MFFHVILERNMQLHPRHFGARLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIENVGKGLIRDGTGFVTFPVKYKCVVFRPVEGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSADTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG

Click here to download the sequence:
Link to NCBI Protein BLAST