Transcript Information: S_Transcript_314244.p1


Annotated TAIR IDAT1G72440.1
Annotated Gene NameCCAAT-binding factor
Annotated Gene Symbol(s)EDA25, SWA2
Annotation TypeHomolog
Chromosome Positionchr1:27268325-27273596 | Reverse length=1043
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.877536219141
Replicate 25.9534511504405
Replicate 37.5381024468685
Condition 2: 8 Hour
Replicate 112.016688194575
Replicate 210.919592788438
Replicate 313.026351314155
Condition 3: 24 Hour
Replicate 13.5541278695014
Replicate 23.597430408944
Replicate 33.4029742451347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314244.p1 GENE.S_Transcript_314244~~S_Transcript_314244.p1 ORF type:5prime_partial len:252 (-),score=113.27 S_Transcript_314244:74-829(-)
CCTGAAGACGTTATCTTTCATAAGTTCTACATGAACAAGATGAGTACATCAACCAAGCCAAAGAAGAAAAAGAAGAAGAAGAAGGCAGCTGAAGAAGAGGAAGCAGAGGACTTGTATGGTGGAGATGAGAGTGATAATGAAGAGATTGAGAATATGCTAGATGCCACTGAGCCATCCCTTGAAGCTGATGGTGACTATGACTATGATGATCTGGACAATATTGCTGATGAAGATGACGATGATTTGGTTGGCAATATTAGTGACAACGAAATGAAGATGCCCTCGGACAGTGAAGAGGCTGAGGATGCACCTGGTTTTGGCTCTGGTGCAAGTGATGACGATATTGATATTGGTGACGCAGATGATGTCAGTGATGACGATATTGACATTGGTGATGATGACGATGATGATATTGACTTTGGTGATGCGGATGATGCCAGCTATGATGAAGACGATGGTCCATCCATGCCCAAGAAAGGGAGGAGGAAGTCCTCTAAAAAATCTTCAGCCTCTCCTTTTGCTAGCTTGGATGAGTATGAGCATTTGCTGAATGATGATGATTCGATGGAGGAAAAATCGGATAAGAAGGGTAAGACCAAGAAGGGAAAGAAAAGAAGATCTTCCCAAAGTGATGATGATGTGCAAATTAAGAAAATAAAGAAACATGGAGACCCTTCTCAAAGCATTGTTGAAAAGCAAGTTGCGAAAACAGAGAAAAGCAGAAAACCAAGGAGAAAGAAGAGCAAAAACGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314244.p1 GENE.S_Transcript_314244~~S_Transcript_314244.p1 ORF type:5prime_partial len:252 (-),score=113.27 S_Transcript_314244:74-829(-)
PEDVIFHKFYMNKMSTSTKPKKKKKKKKAAEEEEAEDLYGGDESDNEEIENMLDATEPSLEADGDYDYDDLDNIADEDDDDLVGNISDNEMKMPSDSEEAEDAPGFGSGASDDDIDIGDADDVSDDDIDIGDDDDDDIDFGDADDASYDEDDGPSMPKKGRRKSSKKSSASPFASLDEYEHLLNDDDSMEEKSDKKGKTKKGKKRRSSQSDDDVQIKKIKKHGDPSQSIVEKQVAKTEKSRKPRRKKSKNE*

Click here to download the sequence:
Link to NCBI Protein BLAST