Transcript Information: S_Transcript_314518.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeHomolog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11749669419506
Replicate 20.43833356736784
Replicate 30.081424883371305
Condition 2: 8 Hour
Replicate 10.42368325133377
Replicate 20.34570185536001
Replicate 30.23527425612562
Condition 3: 24 Hour
Replicate 10
Replicate 20.15009146739303
Replicate 30.66813362662559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314518.p1 GENE.S_Transcript_314518~~S_Transcript_314518.p1 ORF type:3prime_partial len:453 (+),score=105.91 S_Transcript_314518:225-1580(+)
ATGAAGGAAGAAAACCCAACACCAAAAAAGAACAGAATAACAAAAACATCGAAATTCTCGGATCAAAATCAGCCACCACCAAGAAGTACCAAATTAAAGTCAGCCTCTTTATGGGGTTCTCACATAGTGAAAGGCTTGGCAGGGGAAAGAAAAAGCAAGCTCCAAACTTGTTCAACATTACCCACTAAGAAATCACAACCTTCAACCATCACCAAAAAGAACAATAACAACAACGGTAATACTCCATCTAACAAAGTAAAGAGGGGTTTTATTGGTGACTTATCTTGCTCGGTAGCAGCAATTCAAGTCCATCCCCACTCCCAATGCCAAACCACCAACAAGTCATTGGGCTCTCGTGATTTATTCGTCGAAATAGAGAATTTAAGGGGCCTGTTGAAAGAATCAAAGGACAGAGAGTTTCAGTTACAGTCTGAGTTGTGTCAAAGTAAGAGGAACCAGGAGAGGGTTTTAGAGTTAGAGAAAGAGTTTGAAGCTAAGCAAAATGAGGTTCAGGAGCTTATGGTTAAAGTTAACTTGCTTGAAATAGAGAAAACCAATCTTAAGAAGGAATTATTGTCTTTGAATTCTGATTCAAGGAGCCATGAAAATGACATTCTTCTGAAAAGCCAGAAATCTCATACCCTTATGGATGTGGTTGAACTTAGGCGCCTCAACAAGGAGTTGCTGCTTCAGAAAAGAGATCTTACTTGTAGAGTTGCTTCTATGGAGTTCCAACTAGCCAATCTAGCCAAGCCCCCTGAGAGTGAAATCATCGCTAAGATAAGAGCAGAGGCATCAATGTTGAGGAACACCAATGAAGATTTGTCACAACAAGTGGAAGGTCTGCAGGTGAATAGGTTTAATGAGGTAGAGGAGCTAGCTTATCTACGATGGGTAAATGCTCAGTTGAGTAATGAGCTTCGCAACTCGTCCTGCTCTTGTACTGCTTCTTCTAATGTAGGATCGAGTCCTTTTTCTATAAAGAAACTAAATAAATGGCCTATAGCTGTTACTGATGATAATGATCTGGAAGGGAATAATAGCTCGTCAAGAAGACACTCAATTAGTGGAAGTGGATCAAAGTCTTGTGATGAGGAGGATATTTTGGTGATAAATAAGAGAAGACAATCTGATGGGCTTGAGTGCAAAAAAGCAATTGAATGTGGGGAACAAGAAGAGGAACTGAATTTTCATCAAAAGCATGAAGAAGCCAGGACTAAACTTGTTGTGGTCCCTTCAGATATTGAGAAGAGGGCTTTAAGAGTACCAAATCCACCACCAAGACCTTCACCTGACAATTCAACTATTTGTAAAGAAGATCAAGCTTCTATGGCGGCACCTCCCCCACCACCTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314518.p1 GENE.S_Transcript_314518~~S_Transcript_314518.p1 ORF type:3prime_partial len:453 (+),score=105.91 S_Transcript_314518:225-1580(+)
MKEENPTPKKNRITKTSKFSDQNQPPPRSTKLKSASLWGSHIVKGLAGERKSKLQTCSTLPTKKSQPSTITKKNNNNNGNTPSNKVKRGFIGDLSCSVAAIQVHPHSQCQTTNKSLGSRDLFVEIENLRGLLKESKDREFQLQSELCQSKRNQERVLELEKEFEAKQNEVQELMVKVNLLEIEKTNLKKELLSLNSDSRSHENDILLKSQKSHTLMDVVELRRLNKELLLQKRDLTCRVASMEFQLANLAKPPESEIIAKIRAEASMLRNTNEDLSQQVEGLQVNRFNEVEELAYLRWVNAQLSNELRNSSCSCTASSNVGSSPFSIKKLNKWPIAVTDDNDLEGNNSSSRRHSISGSGSKSCDEEDILVINKRRQSDGLECKKAIECGEQEEELNFHQKHEEARTKLVVVPSDIEKRALRVPNPPPRPSPDNSTICKEDQASMAAPPPPPP

Click here to download the sequence:
Link to NCBI Protein BLAST