Transcript Information: S_Transcript_314520.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeHomolog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92086509464292
Replicate 20.61073465903155
Replicate 30.63815695791005
Condition 2: 8 Hour
Replicate 10.73790277913955
Replicate 20.38705620483956
Replicate 30.51630080704107
Condition 3: 24 Hour
Replicate 10.22676349644215
Replicate 20.6273719467501
Replicate 30.43636755026152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314520.p1 GENE.S_Transcript_314520~~S_Transcript_314520.p1 ORF type:complete len:289 (+),score=62.64 S_Transcript_314520:235-1101(+)
ATGAAGGAAGAAAAACCAACACCAAAAACGAACAGAATAACAAAAACATCGAAATTCTCGGATCAAAATCAGCCACCACCAAGAAGTACCAAATTAAAGTCAGCCTCTTTATGGGGTTCTCACATAGTGAAAGGCTTGGCAGGGGAAAGAAAAAGCAAGCTCCAAACTTGTTCAACATTACCCACTAAGAAATCACAACCTTCAACCATCACCAAAAAGAACAATAACAACAACGGTAATACTCCATCTAACAAAGTAAAGAGGGGTTTTATTGGTGACCTATCTTGCTCTGTAGCAGCAATTCAAGTTCATCCCCACTCCCAATGCCAAACCACCAACAAGTCATTGGGCTCTCGTGATTTATTCGTCGAAATAGAGAATTTAAGGGGCCTGTTGAAAGAATCAAAGGACAGAGAGTTTCAGTTACAGTCTGAGTTGTGTCAAAGTAAGAGGAACCAGGAGAGGGTTTTAGAGTTAGAGAAAGAGTTTGAAGCTAAGCAAAATGAGGTTCAGGAGCTTATGGTTAAAGTTAACTTGCTTGAAATAGAGAAAACCAATCTTAAGAAGGAATTATTGTCTTTGAATTCTGATTCAAGGAGCCATGAAAACGACATTCTTCTGAAAAGCCAAAAATCTCATACCCTTATGGACGTGGTTGAACTTAGGCGTCTCAACAAGGAGTTGCAGCTTCAGAAAAGAGATCTTACTCGTAGAGTTGCTTCTATGGAGTCCCAACTAGCCAATCTAGCCAAGCCCCCTGAGGTGTTCTTGTTGTTGTTGTTGTTGTTTGTTGTTGTTGTTGTAGCTGTTGCTGCAGCTGATATTGTTGTTGTTGAGTACACAAGAGGGGGGGTGAATTGTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314520.p1 GENE.S_Transcript_314520~~S_Transcript_314520.p1 ORF type:complete len:289 (+),score=62.64 S_Transcript_314520:235-1101(+)
MKEEKPTPKTNRITKTSKFSDQNQPPPRSTKLKSASLWGSHIVKGLAGERKSKLQTCSTLPTKKSQPSTITKKNNNNNGNTPSNKVKRGFIGDLSCSVAAIQVHPHSQCQTTNKSLGSRDLFVEIENLRGLLKESKDREFQLQSELCQSKRNQERVLELEKEFEAKQNEVQELMVKVNLLEIEKTNLKKELLSLNSDSRSHENDILLKSQKSHTLMDVVELRRLNKELQLQKRDLTRRVASMESQLANLAKPPEVFLLLLLLFVVVVVAVAAADIVVVEYTRGGVNCV*

Click here to download the sequence:
Link to NCBI Protein BLAST