Transcript Information: S_Transcript_31469.p1


Annotated TAIR IDAT4G04790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2435007-2439344 | Reverse length=821
E-Value1.9E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2278491991001
Replicate 26.468408756635
Replicate 37.2932638148784
Condition 2: 8 Hour
Replicate 18.5301561268532
Replicate 210.474092772236
Replicate 38.163000730544
Condition 3: 24 Hour
Replicate 18.3407736964087
Replicate 26.2583025148323
Replicate 37.0793692818905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31469.p1 GENE.S_Transcript_31469~~S_Transcript_31469.p1 ORF type:complete len:880 (+),score=154.79,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|40,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|37,PPR_3|PF13812.2|6.2e+02,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|37,PPR|PF01535.16|0.14,PPR|PF01535.16|41,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.051,PPR|PF01535.16|0.0017,PPR|PF01535.16|59,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|38,TPR_19|PF14559.2|5.1,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7.3e+02,TPR_19|PF14559.2|0.073 S_Transcript_31469:75-2714(+)
ATGCCCCGTACCAAAGTCAAGAAACTCAGCTCTCTTTTCCGCTCCGCCGTCAAAGCCACGGCTACCGCCGCCACCACCGCTAAACGCGACGTCGTCAAGCTCAAAGTCTCTTCTTCTTCTCCAGCTCGTTCTACCAGTTCCACCAACTTACGGAGGTCCACTAAGAGTAAAAAAGATGGGCCTATCAGTGGCATGATTCACCAAAGCCTTCATCATGGCTCTCCTTCGCTCTCCTCTTCTGCTGGAATTAGTAGTAGTGCGAGTGCTAGTGCTAGAGCAGATACTGATGAAGACGATTCTTCTGAAGATGATTCAGCTAAGCATATATCAAATGAGATATCAACAATACTGTGTGGTTATGGTGGCATGTTTTGGGAATTAAATGATGATTCATCTGAGACAGAAGTAGCTGATGGTGACAATGATTCAGAGGATGATCCTGAATCTTCTTGGTTTTCCAACTTGTTTAACAGCAGTATGTCATTGCGCCGGAAAGAATTATCCCGTGAAAGGAAGAATAAATGGATTTTCAAGAATACTCAAAAAAACCGTTTTGATAAGTTAGTCAATATGTGCTTAACAAAACTGGGATCAGGTTCAACTTTTGAGGTGCTGTATAAACTAGGCCGAGAGACTGGTTTGAAGGAGTACACTGCTTTTATAAATGGTTGCATACAGACAGCGAGACGTAGCAAAGATGAAAAAGCCCAAGTAGAGCAGGTTTTGGAGATTTACCAGCTGTTCCAGTTAATGAAGGAACGGGGTTTTCCAATAGAAGAGGAAACATTCGGCCCTTTTCTTTTGTATCTAATTGACATGCACTTAACAGATCACTTTTTTCTTTTTGTTGAGATTGTCAAAGATGAAGATGTTTGTTTACATCCTCGATTAGGCTACTATGAAATGCTTCTTTGGATTGAGATGGATGATGATGAAAAGATTCAGGAGCTTTGTGATCATATTGCTACGGGTGAGAGTGAATCTGGATCCTTATTGCATGAAAATTACTTGTTGGCATTGTGTGAAAGAGACAGGGAAAAGGACCTACGGCCGTTGTTAGAAATCATAGACATAACCAAAGTTTCATCCATTAAGAATGTATCTTGTATTTTTCAATCCTTTGGGAGGCTATCACTGGAGTCCTACGCAGAGTCTTTTATCCAGACATTGAAAGATTATGATCATGGGGCTCAAAGCATCTCGAATCTGGTTTTTTGCTATGCAACTAGCTTGAAAAATTTAGCGGTGGAGGATGTTATCATGAAGTTCAAAGAGATGCATGTGACACTGGATATCAAGCTTCTACCTGGGTCTTATGAAAATCTCATTAAATTTTGCTGTGATGCACATAACGTTCATATGGCTTTGGATATAGTTGACGAGATGTGTGAAGCTGGATTAGTGTTATCCACAGAAACTCTCAACTACATATGTTGTGCTTGTGAGGACACTTCTGAGTATATTTTGGTTCGCCGGATCCATTCAATACTCTGTCACCACAATCTGAAGGCAAATAATGAAACGTTCAGGAGTATTATAAATCTGAATGTTAGAATGAAAGATTTTGACAGTGCATATACTGTGCTGAAGGGTTTGGAGAGGTTTAATTTAATGCCCACAGCAAGTATGTATAATGCTATAATAGCTGGTTATTACCGAGAGAAAAACTTGGCTGGCGTACTGAGAGTTCTTGAAGAAATGAAGCATGCAAAAGTCAAAGCTGATGCCCAGACTTTCAGCTATCTTATATCCAATTCTGTTTGCGAAGAAGACGTCGTTAAGTATTTTGAAGAACTAAAGCGTACTGGAGTTCCTGTTACAAAGCATATTTACATGGCTCTCATCAATGCATATGCTGCGTGTGGCCAATTCGAGAAGGCTAAGCAGGTGGTCCTAGAGAAAGGGGTACCTGTAAAGAACTTAACTGAAATCAGAAGTGTTCTTGTCGCTAGCCTGGCATCACATGGGCAGATTTCCGATGCCCTGGAGATTTATATTGAAATGAAACAGAGTGGTTGCTGTTTAGAGCCGAAGGCTATTTTGACACTCATTGAAAGCCTGGTGTTTGAAGAGGATTTGAGTACGTTGCTTCAATTACTTGAAGATTTGAATGATCCTGATAATTGGGTTGACGGTTGCTGCAGAGTTATCTTGTGCTGTGTCAGAAACAAGGAGCTAAGGTCTGCTGTTGACTTGCTTAGGAAACTTGCAGATTATTTCAAAGATGATGGATTGGCGAGAGAAGTTATCTTTGATGAGGTATTTTCACAAATAGCAGACATGGAGTCTCCTGATTTGCAGATTGGCTGGGGCTTGCTTAAAGCTATCAAGGAAGAACTTAAGCTCCGTCCTTCTCGAAAATGTCTGGATTTTCTACTCAGTGCTTGTGTCAGTATCAAGGATCTCCAGAGAGCTCAGTTGGTTTGGAATGAGTACCCAGAAGCTGGCCTTCCGTACAACATTTTAAGCTACTTACGGATGTACCAGGCTTATTTGGCTTCAGGAAGTTACAAAGCAGCCACCCGCTTCTTGAGTAAAATACCGAAAGATGATCTCCATGTTCAATCTGTGATCCACGCATGTGGTGCAACTTACGGAAAGGCCAAGGACAAGACAAAGAAGAAGAAGAAGAAAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31469.p1 GENE.S_Transcript_31469~~S_Transcript_31469.p1 ORF type:complete len:880 (+),score=154.79,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|0.0029,PPR_2|PF13041.2|40,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|37,PPR_3|PF13812.2|6.2e+02,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|37,PPR|PF01535.16|0.14,PPR|PF01535.16|41,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.051,PPR|PF01535.16|0.0017,PPR|PF01535.16|59,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|38,TPR_19|PF14559.2|5.1,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7.3e+02,TPR_19|PF14559.2|0.073 S_Transcript_31469:75-2714(+)
MPRTKVKKLSSLFRSAVKATATAATTAKRDVVKLKVSSSSPARSTSSTNLRRSTKSKKDGPISGMIHQSLHHGSPSLSSSAGISSSASASARADTDEDDSSEDDSAKHISNEISTILCGYGGMFWELNDDSSETEVADGDNDSEDDPESSWFSNLFNSSMSLRRKELSRERKNKWIFKNTQKNRFDKLVNMCLTKLGSGSTFEVLYKLGRETGLKEYTAFINGCIQTARRSKDEKAQVEQVLEIYQLFQLMKERGFPIEEETFGPFLLYLIDMHLTDHFFLFVEIVKDEDVCLHPRLGYYEMLLWIEMDDDEKIQELCDHIATGESESGSLLHENYLLALCERDREKDLRPLLEIIDITKVSSIKNVSCIFQSFGRLSLESYAESFIQTLKDYDHGAQSISNLVFCYATSLKNLAVEDVIMKFKEMHVTLDIKLLPGSYENLIKFCCDAHNVHMALDIVDEMCEAGLVLSTETLNYICCACEDTSEYILVRRIHSILCHHNLKANNETFRSIINLNVRMKDFDSAYTVLKGLERFNLMPTASMYNAIIAGYYREKNLAGVLRVLEEMKHAKVKADAQTFSYLISNSVCEEDVVKYFEELKRTGVPVTKHIYMALINAYAACGQFEKAKQVVLEKGVPVKNLTEIRSVLVASLASHGQISDALEIYIEMKQSGCCLEPKAILTLIESLVFEEDLSTLLQLLEDLNDPDNWVDGCCRVILCCVRNKELRSAVDLLRKLADYFKDDGLAREVIFDEVFSQIADMESPDLQIGWGLLKAIKEELKLRPSRKCLDFLLSACVSIKDLQRAQLVWNEYPEAGLPYNILSYLRMYQAYLASGSYKAATRFLSKIPKDDLHVQSVIHACGATYGKAKDKTKKKKKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST