Transcript Information: S_Transcript_31472.p1


Annotated TAIR IDAT4G21880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11605156-11610651 | Forward length=843
E-Value2E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0712949074551
Replicate 22.2114824438547
Replicate 31.8051262912015
Condition 2: 8 Hour
Replicate 14.5769116010828
Replicate 23.2713552256204
Replicate 33.996721425934
Condition 3: 24 Hour
Replicate 12.035077589336
Replicate 22.1648216246275
Replicate 31.0112612143561


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31472.p1 GENE.S_Transcript_31472~~S_Transcript_31472.p1 ORF type:complete len:848 (+),score=150.92,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|20,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|5.9e+02,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|36,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0032,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.048,PPR|PF01535.16|0.0016,PPR|PF01535.16|57,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|36,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|0.07 S_Transcript_31472:75-2618(+)
ATGCCCCGTACCAAAGTCAAGAAACTCAGCTCTCTTTTCCGCTCCGCCGTCAAAGCCACGGCTACCGCCGCCACCACCGCTAAACGCGACGTCGTCAAGCTCAAAGTCTCTTCTTCTTCTCCAGCTCGTTCTACCAGTTCCACCAACTTACGGAGGTCCACTAAGAGTAAAAAAGATGGGCCTATCAGTGGCATGATTCACCAAAGCCTTCATCATGGCTCTCCTTCGCTCTCCTCTTCTGCTGGAATTAGTAGTAGTGCGAGTGCTAGTGCTAGAGCAGATACTGATGAAGACGATTCTTCTGAAGATGATTCAGCTAAGCATATATCAAATGAGATATCAACAATACTGTGTGGTTATGGTGGCATGTTTTGGGAATTAAATGATGATTCATCTGAGACAGAAGTAGCTGATGGTGACAATGATTCAGAGGATGATCCTGAATCTTCTTGGTTTTCCAACTTGTTTAACAGCAGTATGTCATTGCGCCGGAAAGAATTATCCCGTGAAAGGAAGAATAAATGGATTTTCAAGAATACTCAAAAAAACCGTTTTGATAAGTTAGTCAATATGTGCTTAACAAAACTGGGATCAGGTTCAACTTTTGAGGTGCTGTATAAACTAGGCCGAGAGACTGGTTTGAAGGAGTACACTGCTTTTATAAATGGTTGCATACAGACAGCGAGACGTAGCAAAGATGAAAAAGCCCAAGTAGAGCAGGTTTTGGAGATTTACCAGCTGTTCCAGTTAATGAAGGAACGGGGTTTTCCAATAGAAGAGGAAACATTCGGCCCTTTTCTTTTGTATCTAATTGACATGCACTTAACAGATCACTTTTTTCTTTTTGTTGAGATTGTCAAAGATGAAGATGTTTGTTTACATCCTCGATTAGGCTACTATGAAATGCTTCTTTGGATTGAGATGGATGATGATGAAAAGATTCAGGAGCTTTGTGATCATATTGCTACGGGTGAGAGTGAATCTGGATCCTTATTGCATGAAAATTACTTGTTGGCATTGTGTGAAAGAGACAGGGAAAAGGACCTACGGCCGTTGTTAGAAATCATAGACATAACCAAAGTTTCATCCATTAAGAATGTATCTTGTATTTTTCAATCCTTTGGGAGGCTATCACTGGAGTCCTACGCAGAGTCTTTTATCCAGACATTGAAAGATTATGATCATGGGGCTCAAAGCATCTCGAATCTGGTTTTTTGCTATGCAACTAGCTTGAAAAATTTAGCGGTGGAGGATGTTATCATGAAGTTCAAAGAGATGCATGGGACACTGGATATCAAGCTTTTACCTGGGTCTTATGAGAATCTCATTAAATTTTGCTGTGATGCACATAACGTTCATATGGCTTTGGATATAGTTGACGAGATGTGTGAAGCTGGATTAGTGTTATCCACAGAAACTCTCAACTACATATGTTGTGCTTGTGAGGACGCTTCTGAGTATATTTTGTTCGACAGCGCATATACTGTGCTGAAGGGTTTGGAGAGGTTTAATTTAATGCCCACAGCAAGTATGTATAATGCTATAATAGCTGGTTATTACCGAGAGAAAAACTTGGCTGGCGTACTGAGAGTTCTTGAAGAAATGAAGCATGCAAAAGTCAAAGCTGATGCCCAGACTTTCAGCTATCTTATATCCAATTCTGTTTGCGAAGAAGACGTCGTTAAGTATTTTGAAGAACTAAAGCATGCTGGAGTTCCTGTTACAAAGCATATTTACATGGCTCTCATCAATGCATATGCTGCGTGTGGCCAATTCGAGAAGGCTAAGCAGGTGGTCCTAGAGAAAGGGGTACCTGTAAAGAACTTAACTGAAATCAGAAGTGTTCTTGTCGCTAGCCTGGCATCACATGGGCAGATTTCCGATGCCCTGGAGATTTATATTGAAATGAAACAGAGTGGTTGCTGTTTAGAGCCGAAGGCTATTTTGACACTCATTGAAAGCCTGGTGTTTGAAGAGGATTTGAGTACGTTGCTTCAATTACTTGAAGATTTGAATGATCCTGATAATTGGGTTGACGGTTGCTGCAGAGTTATCTTGTGCTGTGTCAGAAACAAGGAGCTAAGGTCTGCTGTTGACTTGCTTAGGAAACTTGCAGATTATTTCAAAGATGATGGATTGGCGAGAGAAGTTATCTTTGATGAGGTATTTTCACAAATAGCAGACATGGAGTCTCCTGATTTGCAGATTGGCTGGGGCTTGCTTAAAGCTATCAAGGAAGAACTTAAGCTCCGTCCTTCTCGAAAATGTCTGGATTTTCTACTCAGTGCTTGTGTCAGTATCAAGGATCTCCAGAGAGCTCAGTTGGTTTGGAATGAGTACCCAGAAGCTGGCCTTCCGTACAACATTTTAAGCTACTTACGGATGTACCAGGCTTATTTGGCTTCAGGAAGTTACAAAGCAGCCACCCGCTTCTTGAGTAAAATACCGAAAGATGATCTCCATGTTCAATCTGTGATCCACGCATGTGGTGCAACTTACGGAAAGGCCAAGGACAAGACAAAGAAGAAGAAGAAGAAAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31472.p1 GENE.S_Transcript_31472~~S_Transcript_31472.p1 ORF type:complete len:848 (+),score=150.92,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|20,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|5.9e+02,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|36,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.13,PPR|PF01535.16|0.0032,PPR|PF01535.16|2e+03,PPR|PF01535.16|0.048,PPR|PF01535.16|0.0016,PPR|PF01535.16|57,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|36,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7e+02,TPR_19|PF14559.2|0.07 S_Transcript_31472:75-2618(+)
MPRTKVKKLSSLFRSAVKATATAATTAKRDVVKLKVSSSSPARSTSSTNLRRSTKSKKDGPISGMIHQSLHHGSPSLSSSAGISSSASASARADTDEDDSSEDDSAKHISNEISTILCGYGGMFWELNDDSSETEVADGDNDSEDDPESSWFSNLFNSSMSLRRKELSRERKNKWIFKNTQKNRFDKLVNMCLTKLGSGSTFEVLYKLGRETGLKEYTAFINGCIQTARRSKDEKAQVEQVLEIYQLFQLMKERGFPIEEETFGPFLLYLIDMHLTDHFFLFVEIVKDEDVCLHPRLGYYEMLLWIEMDDDEKIQELCDHIATGESESGSLLHENYLLALCERDREKDLRPLLEIIDITKVSSIKNVSCIFQSFGRLSLESYAESFIQTLKDYDHGAQSISNLVFCYATSLKNLAVEDVIMKFKEMHGTLDIKLLPGSYENLIKFCCDAHNVHMALDIVDEMCEAGLVLSTETLNYICCACEDASEYILFDSAYTVLKGLERFNLMPTASMYNAIIAGYYREKNLAGVLRVLEEMKHAKVKADAQTFSYLISNSVCEEDVVKYFEELKHAGVPVTKHIYMALINAYAACGQFEKAKQVVLEKGVPVKNLTEIRSVLVASLASHGQISDALEIYIEMKQSGCCLEPKAILTLIESLVFEEDLSTLLQLLEDLNDPDNWVDGCCRVILCCVRNKELRSAVDLLRKLADYFKDDGLAREVIFDEVFSQIADMESPDLQIGWGLLKAIKEELKLRPSRKCLDFLLSACVSIKDLQRAQLVWNEYPEAGLPYNILSYLRMYQAYLASGSYKAATRFLSKIPKDDLHVQSVIHACGATYGKAKDKTKKKKKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST