Transcript Information: S_Transcript_31483.p2


Annotated TAIR IDAT4G17840.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9918222-9920190 | Reverse length=422
E-Value4.7E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1437.47399290708
Replicate 2481.30126534715
Replicate 3495.42747205398
Condition 2: 8 Hour
Replicate 1333.46483626037
Replicate 2312.28648991618
Replicate 3292.1439113532
Condition 3: 24 Hour
Replicate 1549.26415954775
Replicate 2430.30195677832
Replicate 3461.59796335939


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31483.p2 GENE.S_Transcript_31483~~S_Transcript_31483.p2 ORF type:complete len:146 (+),score=20.18,Abi|PF02517.12|1.3e-05 S_Transcript_31483:1475-1912(+)
ATGGCGGCACTGGCTGGTGTACTGCCTCCATTCGTACCATTTGCTCAGGCATTTGCAGCCGTCATTACAGCTGCACTTACAGGTTCTCTCTATTATATAGCTGCCTCACCGAAAGATCCCACATATGTGGTAGCACCTGTTTTAGAATCTCGCTCTGGCCGCTGGGATTTGAAGAAGCTCTTTTCAGCCTGGTATGAACGAAGGCAAATGAAAAGAATATACTCACCGCTCCTAGAGGGAATTTTAGCCCTTTACCTTGGCTTTGAGTGGATACAAACAAACAATATACTTGCACCCATCATTACACATGGGATATACTCTGCTGTTGTTCTTGGACACGGCTTGTGGAAGATTCATGATCACCGAAGAAGGTTGCGCCAAAGAATCCAACAGCTAAAATCAGAAAAGAAAGATTCCAACAGGACAAGTGCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31483.p2 GENE.S_Transcript_31483~~S_Transcript_31483.p2 ORF type:complete len:146 (+),score=20.18,Abi|PF02517.12|1.3e-05 S_Transcript_31483:1475-1912(+)
MAALAGVLPPFVPFAQAFAAVITAALTGSLYYIAASPKDPTYVVAPVLESRSGRWDLKKLFSAWYERRQMKRIYSPLLEGILALYLGFEWIQTNNILAPIITHGIYSAVVLGHGLWKIHDHRRRLRQRIQQLKSEKKDSNRTSAF*

Click here to download the sequence:
Link to NCBI Protein BLAST