Transcript Information: S_Transcript_3149.p1


Annotated TAIR IDAT5G45290.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18350011-18352092 | Reverse length=546
E-Value4.5E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.886190480925
Replicate 28.9535635704298
Replicate 37.7686867749413
Condition 2: 8 Hour
Replicate 18.4717303999569
Replicate 28.6575989598942
Replicate 39.5264318919523
Condition 3: 24 Hour
Replicate 16.2841445657874
Replicate 26.7137661005276
Replicate 37.7307293638969


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3149.p1 GENE.S_Transcript_3149~~S_Transcript_3149.p1 ORF type:complete len:584 (+),score=102.14,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|4.3e-09,zf-rbx1|PF12678.3|2.2e-08,zf-C3HC4|PF00097.21|4.6e-08,zf-RING_5|PF14634.2|9.4e-06 S_Transcript_3149:374-2125(+)
ATGGGATCTTCAAGCAGTAAAACGCGTCGTTCTGGGGGTGGTGATGCTGTTAGTGTTGCGTCGTATTCTTCTTCCCCAGCTTCCTCGTTTTCATCGTCAGTTGCTGCCAGTACCAGTACTGGTAGTAGTAGTAGTATTCGAAGGAGAAAAGCCGGTAAAAGTAGAGGGGTTTTTAGTTCTGCCTGTCTTGGATCTTCTTCTAGAACTTTGGACTCTGACGATGATGACGAGATTTCAGAGCATCATGATGAAATGGGCAGCGGTCGAGTACAGCGGACTGAAGCAGGGTCTGATGAAGTCAACGTTGAGTGTTACAGAACTGCTAAAAGTGATGGATCTGACGAAATGCCCTGTGTATCATCTAATGTTGAGCTTGGTGAATGGAGTCATGCAAGCAGAGCGGACAGCATTACCAGGCCAGGTGGAAGCTCATCTGAAGCTTTCTCTAGCCGATCTTTGAACCGCTCTGGACGATTTTTGTCTCGCTTCAGTTTTGTTCCTGGGAGTGTTAGTTTTAGGCTGAGTAGAGCTGCCAGTGTAGGTTCATCAAGGGCTTATCCTTCTTCTCCCACAAGTTTTGCTATTTCTAGTGGTGAAGACCACCGTTATTTGCATGGAGGTTGTCCACATGGCTTGATTAGCAGAAACGAGAACCAACCCAGTGAAAATCTGAATTCTTCATGCCGTTCCAGCTCATCTGTTAGATCTCGTAATGGTAATTCTTCTATTAATTTATCACGGAATGCTGCAGCTTCTACTTTATCTAGTTCATTGCAAGACAACCAGATTATGTCTGCCCAAGACTTGGTGGATATTGACAGTGAAAGAACTAGGTCTGATGCTTGTTTTCCCCCTTTTGGAAGTCATACGGATGTAGAAAGTCTAAACAGGAGAACCAGTGACCGTCGAAATGGTGCCAGAGAACATGTGGATCGCAATGTTCGTTTTAGTAGAACTCTAAGTGTTGGAAGGCTGCGTGACAGGGTTCTCCGATGGTCATCGTTTTCAGACTTGACTCTTTCTCCATTGCCGCAGGAGAGAACAGCTTCCAATGCAAATCGTGTTAATTCTCTGGCGTCTTCTCCATACTCTCTGCCTGGTATGCCTCGCTCTTTCTATTCTAGTCAAAATAATGACGTTGAGACATCACATCCAAGAGAAGCCCGGCATCCTGATTTACCGGAGCATAGATCAAATTTCTTGGAACGTCGAAGAAGAATAAGATCTCAGGTACGGGCTCTTCAGCGTTTAGGTAGCCGCTTTGAGACTTTATCAGGGCATGAAAGGTACTGTATTCTATCAGGGCAACATCGAACTGGACGTTGCTCTTGTCGTATCAATACTAGGGATTCAAATTCAAATGATGATGGTGGTGCTCGTGCTAGCATATCAAGAATCGTTGTGCTAGCTGAAGCTCTGTTTGAGGTTCTGGATGAAATTCATCAACAATCAGTGGTCTTATCTTCCCGACCTTCTGTTTCTTCAATTGGATCAGTCCCTGCACCCAATGAAGTTGTTGAATCATTGCCTGTAAAAGTATACAATAAGTCCACAAAATTCCAATGTGAGGAGGCTGCACAATGTTACATATGCCTTGTGGAGTATGAGGAAGGAGATGAGATGCGCATATTACCTTGTCATCATGAATTTCATAAGAATTGCATTGACAAGTGGCTTAAGGAAATTCACAGGGTATGCCCACTTTGTCGTAGGGACATATGCAGATCTGACTCATCATCTCTAGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3149.p1 GENE.S_Transcript_3149~~S_Transcript_3149.p1 ORF type:complete len:584 (+),score=102.14,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|4.3e-09,zf-rbx1|PF12678.3|2.2e-08,zf-C3HC4|PF00097.21|4.6e-08,zf-RING_5|PF14634.2|9.4e-06 S_Transcript_3149:374-2125(+)
MGSSSSKTRRSGGGDAVSVASYSSSPASSFSSSVAASTSTGSSSSIRRRKAGKSRGVFSSACLGSSSRTLDSDDDDEISEHHDEMGSGRVQRTEAGSDEVNVECYRTAKSDGSDEMPCVSSNVELGEWSHASRADSITRPGGSSSEAFSSRSLNRSGRFLSRFSFVPGSVSFRLSRAASVGSSRAYPSSPTSFAISSGEDHRYLHGGCPHGLISRNENQPSENLNSSCRSSSSVRSRNGNSSINLSRNAAASTLSSSLQDNQIMSAQDLVDIDSERTRSDACFPPFGSHTDVESLNRRTSDRRNGAREHVDRNVRFSRTLSVGRLRDRVLRWSSFSDLTLSPLPQERTASNANRVNSLASSPYSLPGMPRSFYSSQNNDVETSHPREARHPDLPEHRSNFLERRRRIRSQVRALQRLGSRFETLSGHERYCILSGQHRTGRCSCRINTRDSNSNDDGGARASISRIVVLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKVYNKSTKFQCEEAAQCYICLVEYEEGDEMRILPCHHEFHKNCIDKWLKEIHRVCPLCRRDICRSDSSSLES*

Click here to download the sequence:
Link to NCBI Protein BLAST