Transcript Information: S_Transcript_314911.p5


Annotated TAIR IDAT5G61340.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24662064-24663044 | Reverse length=326
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61179313184323
Replicate 20
Replicate 30.21198547222529
Condition 2: 8 Hour
Replicate 10.24511942893256
Replicate 20
Replicate 30.24500974258599
Condition 3: 24 Hour
Replicate 10
Replicate 20.26050358133733
Replicate 30.28990855638064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_314911.p5 GENE.S_Transcript_314911~~S_Transcript_314911.p5 ORF type:5prime_partial len:87 (+),score=5.24 S_Transcript_314911:1-261(+)
CATCTCAATGAAGGAAAACCCAAAAACAACCTCAATGGAAAAAACAGCCAAAATCATAAGGAGATCAATCCACAAATTTTTCCAACACTATCAATTCTTCACAACCATACCAACATTCATAGCCTTGCCTTACTCCATCACATTCCTCCTCTCTCAATCCATCCTCCCTCGCTCGTTTTCTCCCCTCCAATCTCTCTCCACTCGAATATACTCGATCTTCGACCCTCCATACTCGAATTTCACTGCCATCTTAAGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_314911.p5 GENE.S_Transcript_314911~~S_Transcript_314911.p5 ORF type:5prime_partial len:87 (+),score=5.24 S_Transcript_314911:1-261(+)
HLNEGKPKNNLNGKNSQNHKEINPQIFPTLSILHNHTNIHSLALLHHIPPLSIHPPSLVFSPPISLHSNILDLRPSILEFHCHLKP*

Click here to download the sequence:
Link to NCBI Protein BLAST