Transcript Information: S_Transcript_315191.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value7.2E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.003452433777
Replicate 24.3489152493178
Replicate 30.70933600321541
Condition 2: 8 Hour
Replicate 12.2555701296968
Replicate 20.53778482307035
Replicate 33.2793611699971
Condition 3: 24 Hour
Replicate 10.31507043496049
Replicate 21.4164882235217
Replicate 32.5464564062858


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315191.p1 GENE.S_Transcript_315191~~S_Transcript_315191.p1 ORF type:complete len:208 (+),score=34.10,DUF640|PF04852.8|8.6e-60 S_Transcript_315191:25-648(+)
ATGCTTAGTTTGCCCCAAATAATGGAAGGCTCGTCCTCGCATAATTCACCCCCAACCCCAAACTATGAAGCCCACCACCAGCATCACCACAACAACCACCAAGCGCAGCGATCGACACCGACACCGACACCAAGCCGTTACGAGTCCCAAAAGCGGAGGGACTGGAACACTTTTGGGCAGTACCTGAAGAACCAACGGCCACCAGTGTCACTCTCCCAGTGCACAAGCCACCATGTGCTGGACTTCCTCAGGTACTTGGATCAGTTCGGAAAGACTAAGGTTCATGGTCTTGGGTGCATGTTTTACGGGCAACCGGAGCCACCGGCTCCGTGTTCTTGCCCCCTCCGGCAAGCCTGGGGCAGCCTTGACGCCCTCATCGGCCGCCTTCGGGCTGCCTTCGAGGAGAGCGGCGGCTCCCCGGAGATGAACCCCTTCGCCGGAAGCGCTATCCGGGTTTATCTGAGGGAGGTGAGGGAGTGCCAAGCTAAGGCTAGGGGTATTCCTTACAAGAAGAAGAAGAAGAAAGGGAGTACTTCTTCTACTTCTAGGGGTGGAGGTTCTTCTTCTTCTAGTGGTGGTGGTGATCATAATTCTCCTTCTTCTATGATGAGGTTTTCCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315191.p1 GENE.S_Transcript_315191~~S_Transcript_315191.p1 ORF type:complete len:208 (+),score=34.10,DUF640|PF04852.8|8.6e-60 S_Transcript_315191:25-648(+)
MLSLPQIMEGSSSHNSPPTPNYEAHHQHHHNNHQAQRSTPTPTPSRYESQKRRDWNTFGQYLKNQRPPVSLSQCTSHHVLDFLRYLDQFGKTKVHGLGCMFYGQPEPPAPCSCPLRQAWGSLDALIGRLRAAFEESGGSPEMNPFAGSAIRVYLREVRECQAKARGIPYKKKKKKGSTSSTSRGGGSSSSSGGGDHNSPSSMMRFSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST