Transcript Information: S_Transcript_315221.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65441806316018
Replicate 20
Replicate 30.75584983949183
Condition 2: 8 Hour
Replicate 11.2235879690158
Replicate 20.7335032340894
Replicate 31.2230404363514
Condition 3: 24 Hour
Replicate 10
Replicate 20.55730684204133
Replicate 30.20673806889439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315221.p1 GENE.S_Transcript_315221~~S_Transcript_315221.p1 ORF type:5prime_partial len:122 (+),score=39.97 S_Transcript_315221:2-367(+)
GCACCGTATGCTAGAGTCTCATCTCTAGAGGATCCCTGCATGGTTAAGTCAAACTATGGGAAGGCACCTCCAACAAGCTTAGAGATGGCAGCAGCCACTGTAGAGACCACCACTATACATGTATCTGATGGTGAGAGACAAAACATGGTTAAGATATCCGAAGTTGTTTCAGAGAAGCAACAAGGAAAGGAATCATCGAAAGGTTTCAGGCGGCTATTGAAGTTTGGGAAGAGAAGTTCAGCTGCAAGTGGATCTAATGTAGAGTCAGATAAAGCAAGTCTTGATGGCTCTGTGGCTGATGATAGTGCATTGAATAGCTCTTCCAGTGAAGGTAATGGCCTCATTGAAGCCTCTTTAATTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315221.p1 GENE.S_Transcript_315221~~S_Transcript_315221.p1 ORF type:5prime_partial len:122 (+),score=39.97 S_Transcript_315221:2-367(+)
APYARVSSLEDPCMVKSNYGKAPPTSLEMAAATVETTTIHVSDGERQNMVKISEVVSEKQQGKESSKGFRRLLKFGKRSSAASGSNVESDKASLDGSVADDSALNSSSSEGNGLIEASLIE*

Click here to download the sequence:
Link to NCBI Protein BLAST