Transcript Information: S_Transcript_315306.p1


Annotated TAIR IDAT5G27720.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)emb1644
Annotation TypeOrtholog
Chromosome Positionchr5:9815904-9817304 | Forward length=129
E-Value7.3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.106871817306
Replicate 244.578924105938
Replicate 342.317236904152
Condition 2: 8 Hour
Replicate 155.796569185923
Replicate 251.792361919367
Replicate 354.895607530637
Condition 3: 24 Hour
Replicate 142.94165453288
Replicate 236.78988591503
Replicate 344.570462030959


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315306.p1 GENE.S_Transcript_315306~~S_Transcript_315306.p1 ORF type:complete len:146 (+),score=35.65,LSM|PF01423.18|5.9e-17 S_Transcript_315306:287-724(+)
ATGCTTCCTTTATCACTACTCAAGACTGCACAAGGCCACCCTATGTTGGTGGAATTGAAGAATGGAGAGACTTACAATGGACATTTGGTTAACTGTGATACTTGGATGAACATTCATCTTCGTGAAGTCATCTGTACCTCTAAGGATGGTGACAGGTTTTGGAGGATGCCCGAGTGTTATATTCGTGGTAACACAATTAAGTATCTGCGAGTGCCTGACGAGGTCATTGATAAAGTTCAGGAGGAGACCAAGAGCCGTTCAGATCGAAAGCCTCCTGGGGTTGGTCGTGGAAGAGGAAGAGGTAGAGAAGATGGTCCTGGGCGACAGCCAAAAGGCATAGGCCGTGGTATGGATGATGGAGCTAAAGTTGCTGGAGGCCGAGGCCGTGGTGGGTCTAGTGGGAAGCCTAGTGGTAAAGCTGGAGGTAGGGGTCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315306.p1 GENE.S_Transcript_315306~~S_Transcript_315306.p1 ORF type:complete len:146 (+),score=35.65,LSM|PF01423.18|5.9e-17 S_Transcript_315306:287-724(+)
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGPGRQPKGIGRGMDDGAKVAGGRGRGGSSGKPSGKAGGRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST