Transcript Information: S_Transcript_315307.p1


Annotated TAIR IDAT5G27720.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)emb1644
Annotation TypeOrtholog
Chromosome Positionchr5:9815904-9817304 | Forward length=129
E-Value7.4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5711114160939
Replicate 29.9418743067814
Replicate 36.4891108442298
Condition 2: 8 Hour
Replicate 19.8728658875616
Replicate 210.219239502097
Replicate 310.131606577676
Condition 3: 24 Hour
Replicate 19.5739921471123
Replicate 28.6738044304539
Replicate 37.3175067101263


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315307.p1 GENE.S_Transcript_315307~~S_Transcript_315307.p1 ORF type:internal len:162 (+),score=10.50 S_Transcript_315307:2-484(+)
CTTGTTAGGTTTCGGGTTTGGCCGCAGAACAACAACAAGAAGATCAAAAGGGTTTCTGGGCGTTTCGTGTTTCCCAAGACGTTTCGCCAGTTTACCATCTCTCATCTTGCCCTAACTAACTCAACATGCTTCCTTTATCACTACTCAAGACTGCACAAGGCCACCCTATGGATGAACATTCATCTTCGTGAAGTCATCTGTACCTCTAAGGATGGTGACAGGTTTTGGAGGATGCCCGAGTGTTATATTCGTGGTAACACAATTAAGTATCTGCGAGTGCCTGACGAGGTCATTGATAAAGTTCAGGAGGAGACCAAGAGCCGTTCAGATCGAAAGCCTCCTGGGGTTGGTCGTGGAAGAGGAAGAGGTAGAGAAGATGGTCCTGGGCGACAGCCAAAAGTAGGGGTGAGCAGAAAAACCCGAAAACTGGGTAACCGCTTTTTTTATCCGGATCCGATTTTTAAAAATCCGAAAATACGGTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315307.p1 GENE.S_Transcript_315307~~S_Transcript_315307.p1 ORF type:internal len:162 (+),score=10.50 S_Transcript_315307:2-484(+)
LVRFRVWPQNNNKKIKRVSGRFVFPKTFRQFTISHLALTNSTCFLYHYSRLHKATLWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGPGRQPKVGVSRKTRKLGNRFFYPDPIFKNPKIRL

Click here to download the sequence:
Link to NCBI Protein BLAST