Transcript Information: S_Transcript_315549.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeHomolog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30071187836362
Replicate 21.4957823428824
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.12042851754227
Condition 3: 24 Hour
Replicate 10
Replicate 20.89630893239792
Replicate 30.28499485203521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315549.p1 GENE.S_Transcript_315549~~S_Transcript_315549.p1 ORF type:internal len:177 (+),score=-1.56,Chloroa_b-bind|PF00504.17|2.4e-33 S_Transcript_315549:3-530(+)
CAACTCGACTTTCGGTGCTTAGAGAAGACAGTCAAGATGTCGGTTGCATTCGGCTCTCCCTCCCGTCTTCTTGCGGCACGACCCGTGCAAGCACGCACAGGTGTCACAGCTCGGGCAAAGGCAGGCAACTGGCTGCCCGGCGCAGACTCGCCAAAGCACCTGGACGGCTCGCTGCCAGGCGACTACGGCTTTGACCCACTCGGCCTGGGTGAGCAGAAGCTGGACCGCCTGCGCGAGAGCGAGCTCATCCATGGCCGCTGGGCGATGCTTGGCGTCGTTGGCGCGCTCGTGCCGGAGCTGCTTGGCTTTGGCGACTGGTTCGAGGCACCTCTGTGGGCCGTCAATGGCGGCACGCCCACGTACTTTGGCGTGCCTGTGCCGCTCGATGTGAAGTCGCTCATCCTGGTGGAGATTGTCGCGATGGCGGGCGTCGAGCTGCTGCGGGCGCAGGAAAGCGAGCCCCTCAAGCGCGCCTACCCGGGCGGCGCCTTTGACCCCATGGGCTTTGGCAAGGACGGCAGCAAGCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315549.p1 GENE.S_Transcript_315549~~S_Transcript_315549.p1 ORF type:internal len:177 (+),score=-1.56,Chloroa_b-bind|PF00504.17|2.4e-33 S_Transcript_315549:3-530(+)
QLDFRCLEKTVKMSVAFGSPSRLLAARPVQARTGVTARAKAGNWLPGADSPKHLDGSLPGDYGFDPLGLGEQKLDRLRESELIHGRWAMLGVVGALVPELLGFGDWFEAPLWAVNGGTPTYFGVPVPLDVKSLILVEIVAMAGVELLRAQESEPLKRAYPGGAFDPMGFGKDGSKL

Click here to download the sequence:
Link to NCBI Protein BLAST