Transcript Information: S_Transcript_315565.p1


Annotated TAIR IDAT4G33170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15995701-15998673 | Reverse length=990
E-Value1E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83747206684134
Replicate 21.0414253812114
Replicate 30.70933600321541
Condition 2: 8 Hour
Replicate 12.1996469033406
Replicate 21.486241692849
Replicate 32.422255409657
Condition 3: 24 Hour
Replicate 10.38190355752787
Replicate 20.67357481957676
Replicate 30.88188966451455


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315565.p1 GENE.S_Transcript_315565~~S_Transcript_315565.p1 ORF type:complete len:572 (+),score=96.09,DYW_deaminase|PF14432.2|2.3e-34,PPR|PF01535.16|10,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.034,PPR|PF01535.16|0.018,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.068,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|2.4e+03,PPR_2|PF13041.2|42,PPR_2|PF13041.2|14,PPR_2|PF13041.2|9.4e+02,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|25,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|67,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|1.6e+04 S_Transcript_315565:133-1848(+)
ATGGTCGACTTTGATACCCAACAAACACCAAATTTCAAAGACCCACGTTCAATACACGCCCACATAATCAAAACATCAAAGACAGATCATTCCCTTCCGTTGCTGAACAAGCTCATCACTTTCTACTCAAAATCCAACCTCTTTTCCGATGCCATTGCCGTTTTCCGTCAAATCCCATTTCCCAATGTTGTCTCTTGGACTGCCCTTATCTCCGGCAACCCCAATTCCCCACTATCTCTCCACCATTTCATCTCCATGCTTCGCTACCAAACCAGGCCTAATGAACGAACTTTAGCGTCAGCTCTCAAGACATGTGCTTCTCTTTATGCTCTATCCTTTGGCCAACAAATACATTCCCTTTCCCTAAAGCTTTGCCTCGCATCCGAGCCATTTTGCGCGTCTGCCTTCGTTCATTTGTATGCTAAATGCAGGTTCCCTGATGATGCCCGCAAGGTGTTCGACGAAATGCCTGAAAGGGATGAAGTTTGTTATTCGTCTGTTATTGTTGGGTTTGCTCAGAATTCTCGTCCTATTGATGCATTGACCTTTTTTGCTCAGATGGTGTCGAGAAATGTGGGGTCCACTGTGTATAGTGTTTCGGGTGCGTTGAGTGCTGGTGCTGAGCTTGCTGCTTTGGAGCACTGCAGGGTGATTCATGGTCATGGACTTGTTACTGGGTTGTGTAGGGCTGTTTATGTGAGTACTGGATTGGTCACTGCATATGGGAAATGTGGAATGGTCTTGGAAGCTAGGAGGGTGTTTGACGAGTCTTTGCAGGATATGAATATAGTGGGTTGGAACGCATTGATGGCCTCCTATGCTCAACAAGGGGATAAAAGCTCAGTTCTTGAGTTGTTCAATTTAGCCGAATCACGAGGGCTCGAACATGATGAATTCAGCTTCTTGGCTGTGTTAACTGCACCGTATAACATGGGCCTGGCTGATGAGACTGAACAGTGGATTAACAGGATGAAAGTAGATTATAGTATAGAGCCATCATTAGAGCACTATACATGCTTAGTAGGTGCATTGGGTAGAGTTGGGAAGTTAGAAGAGGCAGAAAGAATTGCTAATACAATGCCAGTCAAGCCAGATGCAGGCGTGTGGCGGGTATTATTGTCAGCAAGTGCTACTCATAGAGCTGCAGACATTGCTTGGAGGATGAGTAAGCGGCTTTTGGAACTCGAACCACATGATGACACTGCTTATGTTATTGCTGCGAATACGTTCTCAGCCGCAGGGAGATGGAATGAAGCTGCAGAGATCAGGAAGATGATGAATAATGTGAGAGTGAAGAAGGAAGGCGGAAGGAGTTGGCTTGAGGTACGAGGGGAAGTGCATGTGTTCTTGTCAGGGGATAAAGACCATGAAAGGGTAGATGAAACTTATGCAAAGCTTTCAGAACTGATGGTGGAGATTGGTAAATTGGGTTATGTACCAAATTGGAATGAGATGTTGCATGATGTAGAGGAAGGGGAGAAAAGAGAAGGACTTTCATATCACAGTGAGAAGTTAGCATTGGCATTTGGGGTTTTAACAGGTGCAGCAACACCTGGGAAGCCTTTAAGGATTCTAAAGAATCTTAGAATTTGTAGGGACTGTCATGAGGCCTTTAAATATTTCAGCAGGATTTTAGAAAGAGAAATTATTGTCAGAGATGTAAACAGATACCACAGGTTTCTGGACGGATGCTGTACTTGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315565.p1 GENE.S_Transcript_315565~~S_Transcript_315565.p1 ORF type:complete len:572 (+),score=96.09,DYW_deaminase|PF14432.2|2.3e-34,PPR|PF01535.16|10,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.034,PPR|PF01535.16|0.018,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.068,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|2.4e+03,PPR_2|PF13041.2|42,PPR_2|PF13041.2|14,PPR_2|PF13041.2|9.4e+02,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|25,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|67,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|1.6e+04 S_Transcript_315565:133-1848(+)
MVDFDTQQTPNFKDPRSIHAHIIKTSKTDHSLPLLNKLITFYSKSNLFSDAIAVFRQIPFPNVVSWTALISGNPNSPLSLHHFISMLRYQTRPNERTLASALKTCASLYALSFGQQIHSLSLKLCLASEPFCASAFVHLYAKCRFPDDARKVFDEMPERDEVCYSSVIVGFAQNSRPIDALTFFAQMVSRNVGSTVYSVSGALSAGAELAALEHCRVIHGHGLVTGLCRAVYVSTGLVTAYGKCGMVLEARRVFDESLQDMNIVGWNALMASYAQQGDKSSVLELFNLAESRGLEHDEFSFLAVLTAPYNMGLADETEQWINRMKVDYSIEPSLEHYTCLVGALGRVGKLEEAERIANTMPVKPDAGVWRVLLSASATHRAADIAWRMSKRLLELEPHDDTAYVIAANTFSAAGRWNEAAEIRKMMNNVRVKKEGGRSWLEVRGEVHVFLSGDKDHERVDETYAKLSELMVEIGKLGYVPNWNEMLHDVEEGEKREGLSYHSEKLALAFGVLTGAATPGKPLRILKNLRICRDCHEAFKYFSRILEREIIVRDVNRYHRFLDGCCTCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST