Transcript Information: S_Transcript_315591.p1


Annotated TAIR IDAT2G33760.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14275800-14277551 | Forward length=583
E-Value7E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40527413048498
Replicate 20.22398771124381
Replicate 30.28085384898884
Condition 2: 8 Hour
Replicate 12.4897663822033
Replicate 20.68137610070233
Replicate 31.298427265278
Condition 3: 24 Hour
Replicate 10.77621413418355
Replicate 20.34513418644184
Replicate 30.12803068225947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_315591.p1 GENE.S_Transcript_315591~~S_Transcript_315591.p1 ORF type:3prime_partial len:197 (+),score=22.14,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|4e-09,PPR|PF01535.16|13,PPR|PF01535.16|0.019,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.5e+03,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0036 S_Transcript_315591:235-822(+)
ATGATTGTAAAGAACCAACCTTTAGAGCATTACTCTTTCATGAAACTTTTAGATACTTGCATTTCCTCAAATGGGTTCACTTATTCTGCTCTTTTTTTCACAAAGTTTCGTTCTTTTATTGATTCCCATCTTTGTAACTCTGCTCTTAGAAGCTACACCCACTTAAAGAAACACTGGCACTCTGTTTTTCTCTATGTACAAATGCATAAACATGGTATATCCCCTGATTCTCTGACTTTTCCTGCTGTGATTAAGTCTACAGCACATTTATGTTGTCTTAGAGTAGGAAAATCATTTCATTGTTGTGTGGTTAAGATGGGTTTTGGGTTAGACTTGTATGCAAATACTGCCCTTGTTCATATGTATAGTTTTTGTTCGTCGGTTGATGATGCCCAGAAGATGTTTGATGAAATGCCTGAGAGAAATTCTGTTTCTTGGAATGCCTGGATCACTGGTTATGTACATAATAAACGGTTTACGAAAGCAATTGACTTGTTTAAGGAGATGTTGATTGCGGGGGCTGAGCCTAGGGAGGTAACCATGGTGGAGGTTTTATCGGCTTGTGCTAACTTAGGAAATTTGGATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_315591.p1 GENE.S_Transcript_315591~~S_Transcript_315591.p1 ORF type:3prime_partial len:197 (+),score=22.14,PPR_2|PF13041.2|4.5e+02,PPR_2|PF13041.2|0.0022,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|4e-09,PPR|PF01535.16|13,PPR|PF01535.16|0.019,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.5e+03,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0036 S_Transcript_315591:235-822(+)
MIVKNQPLEHYSFMKLLDTCISSNGFTYSALFFTKFRSFIDSHLCNSALRSYTHLKKHWHSVFLYVQMHKHGISPDSLTFPAVIKSTAHLCCLRVGKSFHCCVVKMGFGLDLYANTALVHMYSFCSSVDDAQKMFDEMPERNSVSWNAWITGYVHNKRFTKAIDLFKEMLIAGAEPREVTMVEVLSACANLGNLDG

Click here to download the sequence:
Link to NCBI Protein BLAST