Transcript Information: S_Transcript_316083.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39041077606622
Replicate 20
Replicate 30.13527679278925
Condition 2: 8 Hour
Replicate 10.15642095587139
Replicate 20.27349448214825
Replicate 30.26058493404623
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.12333518046512


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316083.p1 GENE.S_Transcript_316083~~S_Transcript_316083.p1 ORF type:complete len:409 (+),score=74.26,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|38,PPR|PF01535.16|1.2,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.00023,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.21,PPR|PF01535.16|2.9,PPR|PF01535.16|8.6e+02,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|35,PPR_2|PF13041.2|9.1e-06,PPR_2|PF13041.2|5.1e-06,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|11,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|8.1e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|7.4e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|37,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.1e+03 S_Transcript_316083:147-1373(+)
ATGCAGTGCAGGGAAGAATTAAACCTTCTCAAACAAGCTTTCTCTCTCTACAAACAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGTGCTAAATTGAACCATCAATTTTCGGGTTTTCAGTTTCATGCCCATGTAGTGAATTTGGGATTTGAATGGCAAGTCTATATACAAACCGCATTGCTCAACATGTATGTTGATTTTGGATTGTTGATTGAAGCACAAAAGGTGTTTGATAAAAAGCCTGACAGAAATATGGTTACTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGATGCTCTTGCTTTGTTTTGGGAGATGCCCAGTAGGAATATAGTTTCTTGGACTGGTATGATTGATGGGTGCACACAGTTGAAGAATTATGCTGAGGCATATTCACTGTTTCGGAAGATGGCAATGGCTGCAGGCATTATGCCTACTGACGTAACATTCCTAGCCATTTTTCCTGCTATCACGGATCTTGGGGATGTCAAGAATTGCCAGTTGATCCATGCAAATGGATTCAAAAGAGGAATCAATGTGAGTGAGACCCGGGTCACAAACAACCTCATTGATACCTACGCCAAGTGTGGATGTGTTCGAAATGCATTCCAAGTATTCAAGGAGATGCCTGCTAATAGAAGGGATTTGGTGTCTTGGACGTCAATCATATCTGGGTTTGCTATGCATGGCATGGCAAAAGACGCCACAGAGAGTTTCAGGCGGATGGAGAGTTTAGGCTTCAAACCAAACCGAGTTACCTTCTTGAGTGTTCTCAATGCTTGTAGTCATGGAGGATTAGTGGAAGAGGGGTTCCAATTCTTCAGAAGAATGCCTGATTTCCAGATTGTGCCAGAGCTAAAGTATTATGGATGTGTGATTGATATGTTGGGGAGAGCAGGCAGATTGAAAGAAGCAGAGGAGATCGCTTGTCAGATCCCTGACCATATTGATAATGTAATAATTTGGCGAACACTTTTGGGTGCTTGTAGCTTGCATGGCGATGCTGAGATTGCTGAGCGTGTAACCAAGAGGTTACAGGAAATGGAGAGTGGATATGGCGGGGACTATGTTTTGATGTCGAACATATTAACAGGTCATGGAAAGTTCAGCGATGCTGAGAATGTGAGGCTGTTGATGGACTATAGGAATGTTCCCAAGATCCCTGCCCACAGCTCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316083.p1 GENE.S_Transcript_316083~~S_Transcript_316083.p1 ORF type:complete len:409 (+),score=74.26,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|38,PPR|PF01535.16|1.2,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|6.1e-05,PPR|PF01535.16|0.00023,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.21,PPR|PF01535.16|2.9,PPR|PF01535.16|8.6e+02,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|35,PPR_2|PF13041.2|9.1e-06,PPR_2|PF13041.2|5.1e-06,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|11,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|8.1e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|7.4e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|37,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.1e+03 S_Transcript_316083:147-1373(+)
MQCREELNLLKQAFSLYKQAQSLTLYFDSFTYSFLIKACAKLNHQFSGFQFHAHVVNLGFEWQVYIQTALLNMYVDFGLLIEAQKVFDKKPDRNMVTWNVMVTGLVKWGYLEDALALFWEMPSRNIVSWTGMIDGCTQLKNYAEAYSLFRKMAMAAGIMPTDVTFLAIFPAITDLGDVKNCQLIHANGFKRGINVSETRVTNNLIDTYAKCGCVRNAFQVFKEMPANRRDLVSWTSIISGFAMHGMAKDATESFRRMESLGFKPNRVTFLSVLNACSHGGLVEEGFQFFRRMPDFQIVPELKYYGCVIDMLGRAGRLKEAEEIACQIPDHIDNVIIWRTLLGACSLHGDAEIAERVTKRLQEMESGYGGDYVLMSNILTGHGKFSDAENVRLLMDYRNVPKIPAHSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST