Transcript Information: S_Transcript_316085.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4785000686211
Replicate 20.54476023598802
Replicate 32.2768809979754
Condition 2: 8 Hour
Replicate 11.9745731775123
Replicate 21.9333696355319
Replicate 31.0526344496287
Condition 3: 24 Hour
Replicate 11.7529844776403
Replicate 20.83940042875361
Replicate 31.2455330570428


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316085.p1 GENE.S_Transcript_316085~~S_Transcript_316085.p1 ORF type:complete len:162 (+),score=16.65,PPR_2|PF13041.2|0.00078,PPR_2|PF13041.2|10,PPR_2|PF13041.2|6.1e-05,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|12,PPR|PF01535.16|0.35,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|7.5e+03 S_Transcript_316085:307-792(+)
ATGCAGTGCAGGGAAGAATTAAACCTTCTCAAACAAGCTTTCTCTCTCTACAAACAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGTGCTAAATTGAACCATCAATTTTCGGGTTTTCAGTTTCATGCCCATGTAGTGAATTTGGGATTTGAATGGCAAGTCTATATACAAACCGCATTGCTCAACATGTATGTTGATTTTGGATTGTTGATTGAAGCACAAAAGGTGTTTGATAAAAAGCCTGACAGAAATATGGTTACTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGACGCTCTTGCTTTGTTTTGGGAGATTCCCAGTAGGAATATAGTTTGTCTTATGTGTTGTTATTGTTGTCTTTGTTTTTGTTTTTGTTGCAATTGTTGGATTGAGAAAACCATAATTGTTCAGTCATTCCCAGTAGGAATGGAGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316085.p1 GENE.S_Transcript_316085~~S_Transcript_316085.p1 ORF type:complete len:162 (+),score=16.65,PPR_2|PF13041.2|0.00078,PPR_2|PF13041.2|10,PPR_2|PF13041.2|6.1e-05,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|12,PPR|PF01535.16|0.35,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|7.5e+03 S_Transcript_316085:307-792(+)
MQCREELNLLKQAFSLYKQAQSLTLYFDSFTYSFLIKACAKLNHQFSGFQFHAHVVNLGFEWQVYIQTALLNMYVDFGLLIEAQKVFDKKPDRNMVTWNVMVTGLVKWGYLEDALALFWEIPSRNIVCLMCCYCCLCFCFCCNCWIEKTIIVQSFPVGMEV*

Click here to download the sequence:
Link to NCBI Protein BLAST