Transcript Information: S_Transcript_316086.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3285555708047
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.39491463550246
Replicate 20.27619566221885
Replicate 30.13157930620359
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316086.p1 GENE.S_Transcript_316086~~S_Transcript_316086.p1 ORF type:5prime_partial len:162 (+),score=18.82,PPR|PF01535.16|12,PPR|PF01535.16|0.0023,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|7.5e+03,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.057,PPR_2|PF13041.2|0.00021 S_Transcript_316086:2-487(+)
AAACAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGTGCTAAATTGAACCATCAATTTTCGGGTTTTCAGTTTCATGCCCATGTAGTGAATTTGGGATTTGAATGGCAAGTCTATATACAAACCGCATTGCTCAACATGTATGTTGATTTTGGATTGTTGATTGAAGCACAGAAGGTGTTTGATAAAATGCCTGACAGAAATATGGTTGCTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGACGCTCTTGCTTTGTTTTGGGAGATTCCCAGTAGGAATATAGTTTGTCTTATGTGTTGTTATTGTTGTCTTTGTTTTTGTTTTTGTTGCAATTGTTGGATTGAGAAAACCATAACTGTTCAGTCATTGCTGGGTCACTGTGTTGTTATTGTTGTCTTTGTTTTTGTTTTTGTTGCAATTGTTGGATTGAGAAAACCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316086.p1 GENE.S_Transcript_316086~~S_Transcript_316086.p1 ORF type:5prime_partial len:162 (+),score=18.82,PPR|PF01535.16|12,PPR|PF01535.16|0.0023,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|7.5e+03,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.057,PPR_2|PF13041.2|0.00021 S_Transcript_316086:2-487(+)
KQAQSLTLYFDSFTYSFLIKACAKLNHQFSGFQFHAHVVNLGFEWQVYIQTALLNMYVDFGLLIEAQKVFDKMPDRNMVAWNVMVTGLVKWGYLEDALALFWEIPSRNIVCLMCCYCCLCFCFCCNCWIEKTITVQSLLGHCVVIVVFVFVFVAIVGLRKP*

Click here to download the sequence:
Link to NCBI Protein BLAST